Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02192 ATGAGCAGCAACGCGAGAGCACTTCGGAGACTGAGGACAGCGTGTGAGAGGGCCAAGAGGACACTCTCCTCCACCTCACAGACGACCATCGAGATCGACTCGCTCTTTGAAGGTATTGATTTCTACGCGACCATCACTCTGGCCAGGTTTGAGGAACTCAACATGGACCTATTCAGGAAGTGCATGGAGCCCGTTGAGAAGTGTCTCCGTGATGCTAAGGTTGATAAGGTTCAGATTCATGACATTGTCCTTGTTGGAGGCTCCACTAGAATCCCCAAGGTCCAGCAGCTTCTGCAGGACTTCTTGAACGGCAAGGAGCTCTGCAAGAGCATCAACCACGACGAGGCTGTGGCTTACGGGGCTGCTGTCCAAGCTTTCATCCTGAGCGGCAAAGGCGACCAGAAAGTCCAAGACTTGCTTCTTCTCGACGTCACGCCCCTCAGCCTGGGCATTGAAACCACCGATGGGGTGAAGACGGTCTTGATTCCCAGGAATACCACCATACCTATCGAGAAAGAGCAGGTGTTCTCCACCTACTCGGACAACCAGACCAGCGTGCTGATTCAGGTGTATGAGGGTGAGAGGTCAAGGACCAAGGACAACAACCTTCTGGGAACATTTGAGCTCAATGGGATTCCGCCGGCACCAAGAGGGTGCCTCAGATTAACGTGTGCTTCGACATGA 684 0.5336 MSSNARALRRLRTACERAKRTLSSTSQTTIEIDSLFEGIDFYATITLARFEELNMDLFRKCMEPVEKCLRDAKVDKVQIHDIVLVGGSTRIPKVQQLLQDFLNGKELCKSINHDEAVAYGAAVQAFILSGKGDQKVQDLLLLDVTPLSLGIETTDGVKTVLIPRNTTIPIEKEQVFSTYSDNQTSVLIQVYEGERSRTKDNNLLGTFELNGIPPAPRGCLRLTCAST 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02192 227 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 221 - -
Aip04g02192 227 ProSitePatterns Heat shock hsp70 proteins family signature 3. 82 96 IPR018181 -
Aip04g02192 227 Pfam Hsp70 protein 2 219 IPR013126 GO:0005524|GO:0140662
Aip04g02192 227 PRINTS 70kDa heat shock protein signature 79 95 - -
Aip04g02192 227 PRINTS 70kDa heat shock protein signature 111 131 - -
Aip04g02192 227 PRINTS 70kDa heat shock protein signature 138 157 - -
Aip04g02192 227 PANTHER HEAT SHOCK PROTEIN 70KDA 1 221 IPR013126 GO:0005524|GO:0140662
Aip04g02192 227 Gene3D - 61 108 - -
Aip04g02192 227 Gene3D Actin; Chain A, domain 4 2 60 - -
Aip04g02192 227 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 126 225 IPR029047 -
Aip04g02192 227 SUPERFAMILY Actin-like ATPase domain 3 130 IPR043129 -
Aip04g02192 227 Gene3D - 109 125 - -
Aip04g02192 227 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 135 221 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02192 Aip-Chr4 101876267 101876950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02192 1 224 Calmodulin-binding Proteins AT3G12580 84.375 3.95e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02192 K03283 - egr:104423239 374.015