Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02177 ATGTTAAGGCTTTGGTATTCTTGGGGAAGTGTTCTCTTCAGCAAGCCCTTAGCTTGGGCCATTTTCTCTGCTGATCAGAATGACCCAAACAAAACTCCAGCACTATCACGCCACAAGAGAGGATGTAACTGTAAGAAATCATTCTGCCAAAAGAAATACTGTAAATGCTTTCAGGCTGGTGTTGGATGTTCCATAAACTGTAGATGTGACACGTGTAAGAACACGTTTGGTAGAAAGGATGGAGTAGAAACCCAACCAGAAGTAGAAATAGAGGCCTGTGGTAAAGAGTTTGTTGAAAATACATCACGGAAAATTGAAATTCAGAACTCCCACGGGATGTCTAGTTCATTGAATTTTCCGTTAGAGAGTAAGATGTTTGGGACTCTTTGCTCTCAGCTACTTGAGCATTCTCAAACTGTTTCACACCACGAAACGACTGGAGGCAGAGGCAGAAGTCTTTTTCCTTTTAAGTCAGGTGCTTCTGTTTTCTCTAATGACGATGAGTTGATATCCGGTACTCATCTTAAACTCAATTTACGGCCATCTTGGCTTGATGATATTTTTCTATTTCGGTGTCTCATTGATGATGCCCGTCTGCTCTCTATGCTTGAAGATTACACCAACGCCCGGCAAGAAAAAGAGCAAGAACCTCATAAGCTGCGGCTGGAGTTGCAAATTTGTGGAGGAGACTTTGTGTCTTAG 702 0.4231 MLRLWYSWGSVLFSKPLAWAIFSADQNDPNKTPALSRHKRGCNCKKSFCQKKYCKCFQAGVGCSINCRCDTCKNTFGRKDGVETQPEVEIEACGKEFVENTSRKIEIQNSHGMSSSLNFPLESKMFGTLCSQLLEHSQTVSHHETTGGRGRSLFPFKSGASVFSNDDELISGTHLKLNLRPSWLDDIFLFRCLIDDARLLSMLEDYTNARQEKEQEPHKLRLELQICGGDFVS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02177 233 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 28 125 IPR044522 GO:0003700
Aip04g02177 233 SMART CXC_2 37 78 IPR033467 -
Aip04g02177 233 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 39 75 IPR005172 -
Aip04g02177 233 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 28 125 - -
Aip04g02177 233 ProSiteProfiles CRC domain profile. 1 77 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02177 Aip-Chr4 101519455 101522703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02177 16 107 CPP Transcription Factor Family AT3G22760 53.000 2.18e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aip04g02177 TCR 5.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02177 - - aip:107639576 308.145