Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02147 ATGGAAAGTCATCATCTCCATCATCATCATCATCATCATCATCAACAACAATACCCACCGCCACAACATCATAGTATTAGTGCAGCAACAACAACGAGTGCAGGAACTAATAACAACGTTGTGGTTGTTGATGTGACAGGAGATAGTAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTCCTAATGATCCGTGCGGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGCTCTGGGAAGTCATCTCCAACACCATGAAAGAAAAGGGTTTCCATCGAAGCGCTGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGTTATAAGGGATGTGAAACGATGGAGGCAGAAGCAATGAGGCAGCAATTCCCATTCTACAACGAGCTTCAAGCTATCTTCACCGATAGAATGCAGAGGATGCTTTGGGCCGAAGCAGAAGGCGGAGGCGGAGGCGGAGGAGGAGGAGGAGGTTCTTCTACTAACAAGAAGAAAGCTGCGACGGCGCAGCTGTCTTCGGACGAAGAAGAAGAGGAAGAGAGCGAATTAGGAGATCCTCAACAAAAGAATGTAAAAAGAAAGAAAAGATTAAAGAAGGTTAAGAGGGTGGAAGATAGTGGTGGTGCGAGTAATTTGAAGCATCTGAAGGGGATTCTGGAGGAGTTTATGAGGCAACAGATGGAGATGGAGGCGCAATGGATGTCGGCATTCGAGGCGAGGGAGAATGATCGGAGGTTGAAGGAGTTGGAATGGAGGCAGACAATGGAGGCTTTGGAGAATCAGAGGATAATGATGGAGCAGAGATGGAGGGAGAGTGAAGAACAATGGAGGATTAGGGAAGAAGATAGGGCTCATAAGAGAGATGCTCTTATCACTGCACTTCTCAACAAGCTTTCAAGACAACAAGATCAATAA 927 0.4639 MESHHLHHHHHHHHQQQYPPPQHHSISAATTTSAGTNNNVVVVDVTGDSRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNTMKEKGFHRSAEQCKCKWKNLVTRYKGCETMEAEAMRQQFPFYNELQAIFTDRMQRMLWAEAEGGGGGGGGGGGSSTNKKKAATAQLSSDEEEEEESELGDPQQKNVKRKKRLKKVKRVEDSGGASNLKHLKGILEEFMRQQMEMEAQWMSAFEARENDRRLKELEWRQTMEALENQRIMMEQRWRESEEQWRIREEDRAHKRDALITALLNKLSRQQDQ 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02147 308 PANTHER - 31 305 - -
Aip04g02147 308 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 31 305 - -
Aip04g02147 308 CDD GT1 52 117 - -
Aip04g02147 308 MobiDBLite consensus disorder prediction 149 210 - -
Aip04g02147 308 MobiDBLite consensus disorder prediction 19 33 - -
Aip04g02147 308 Coils Coil 259 279 - -
Aip04g02147 308 ProSiteProfiles Myb-like domain profile. 54 110 IPR001005 -
Aip04g02147 308 MobiDBLite consensus disorder prediction 1 33 - -
Aip04g02147 308 Gene3D - 54 115 - -
Aip04g02147 308 MobiDBLite consensus disorder prediction 1 18 - -
Aip04g02147 308 Pfam Myb/SANT-like DNA-binding domain 53 137 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02147 Aip-Chr4 100041142 100042823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02147 8 304 Trihelix Transcription Factor Family AT2G38250 51.852 1.45e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip04g02147 Myb_DNA-bind_4 7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02147 - - aip:107637926 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02147 04 100041142 100042823 Aip04g02147 04 100041142 100042823 ECH