Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02139 ATGGATACGCATAAGAGAGGGAAGAACTTCATGGAAACCAGCATTAACAAATCCAAGGAGCTTTTGAAAAGCATGGACCGTGGCCATGTTTCAGATATCGGTATGACAGAAGTTAACAAAGATCTTGTGGCATCAATTAAGGAAAAACTCGAAGTGATTTCAACTTTGAAATCCATCTTCAGGGTCCTTGTGAAGCTTTTACAAGCAAACCAGAAGGTCAGCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAATGTCAAATTTCTCTTAAGTGAATTAATAATGAAGAAACTCAGGAATGCTATTGATTCCTCTTTATTCAAGCAATGGTTGCATAACTTGCAAAGTGAGATTGGGATTCTAGCTTATGGCACCTTGGCTCTGAGACAAGTTCTAATTCAGTTTGTGGAAGTCTATGTAGTTCTTCAAGAGTGCCTTGAAATGAGAAAAAGATATGTTTTTAAAGAAGCGGTTGCTCCATGGGACAAAGAAGTTATATCTGACTCGAATACTCCAAAGCCTAACCCACAACCATTCTTTTATGCACCTGAAGAAAAAGATATGTTCTTTTATTCTCTTCTTACTCCACAACCACCACTTTTCTAA 741 0.3873 MDTHKRGKNFMETSINKSKELLKSMDRGHVSDIGMTEVNKDLVASIKEKLEVISTLKSIFRVLVKLLQANQKVSFTGSMEVGREIMHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNNVKFLLSELIMKKLRNAIDSSLFKQWLHNLQSEIGILAYGTLALRQVLIQFVEVYVVLQECLEMRKRYVFKEAVAPWDKEVISDSNTPKPNPQPFFYAPEEKDMFFYSLLTPQPPLF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02139 246 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 71 131 - -
Aip04g02139 246 Pfam Aldehyde dehydrogenase family 71 129 IPR015590 GO:0016491
Aip04g02139 246 SUPERFAMILY ALDH-like 70 130 IPR016161 GO:0016491
Aip04g02139 246 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 71 131 - -
Aip04g02139 246 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 138 IPR016162 GO:0016491
Aip04g02139 246 Gene3D - 170 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02139 Aip-Chr4 99603387 99605309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02139 50 136 Aldehyde Dehydrogenase Gene Family AT3G24503 55.172 8.28e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02139 K12355 K01490 adu:107479400 137.887