Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02134 ATGGGTTCCACTCGCTCAGATGCCTCTGCCAATGGCAAAGAACGCCTACGCTGGACACACGAACTCCATGATCGCTTTGTGCACGCTGTAAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGGATGAAGGCCATGGGTGTTTCTGATCTCAGCATTTATCACGTCAAAAGTCACTTGCAGAAATACCGGATCTCCAAATTGATTCCAGAGTCTACCTCAAAAGGAAAGCTTGAGAAGAGAAGCATATCAAATACACTGCCAAATTTCAGTTCTACATGTGCTCTTCAGCTGAAGGAAATTCTTCAAATTCAGAGGGAGGTGCGAAACCGCTTGAGTGATCAAGCAGAGGTTCAGAGAAGGTTGAAGCAAAAAATTGAAGCACAAGACAAATACCTTGATAGAATTGGACAAAGCCATGAAAGCAGAACAACAATCACTAGAAAATCTTCCAAGCCATCATCATTTTGTGCTACAAACAATAATAATAAACATCTCCCTTCTCTCTCTGAGGAATCAGAATCTATTATTGAGACACACCCTGAAGTAGTAGTAGAAGAAGAGGAAGAGCATCAATCATGTTCCAAAAGACAAAGGGTAGTAATAGATGAGCATGTTTTTCCATCAAGCTTTGAACTTGAACTAGAATCATCCACCACCACAGAATTCATTGATCAATCATGGAATCTTTCATGGAGTCAACTTGCAGCTGCATGTGAATCACCTTTGATGCCAGGATTCTTATTATAA 765 0.4157 MGSTRSDASANGKERLRWTHELHDRFVHAVNRLGGPDRATPKGILKGMKAMGVSDLSIYHVKSHLQKYRISKLIPESTSKGKLEKRSISNTLPNFSSTCALQLKEILQIQREVRNRLSDQAEVQRRLKQKIEAQDKYLDRIGQSHESRTTITRKSSKPSSFCATNNNNKHLPSLSEESESIIETHPEVVVEEEEEHQSCSKRQRVVIDEHVFPSSFELELESSTTTEFIDQSWNLSWSQLAAACESPLMPGFLL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02134 254 MobiDBLite consensus disorder prediction 153 178 - -
Aip04g02134 254 Pfam MYB-CC type transfactor, LHEQLE motif 102 141 IPR025756 -
Aip04g02134 254 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Aip04g02134 254 Gene3D - 12 73 - -
Aip04g02134 254 Coils Coil 114 134 - -
Aip04g02134 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 196 - -
Aip04g02134 254 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Aip04g02134 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 73 IPR017930 -
Aip04g02134 254 SUPERFAMILY Homeodomain-like 13 70 IPR009057 -
Aip04g02134 254 MobiDBLite consensus disorder prediction 144 178 - -
Aip04g02134 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 196 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02134 Aip-Chr4 99255300 99259487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02134 3 138 G2-like Transcription Factor Family AT4G28610 49.306 2.79e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip04g02134 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02134 - - aip:107639556 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02134 04 99255300 99259487 Aip04g02134 04 99255300 99259487 ECH