Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02132 ATGGTGGTTATTCAATTTGAACAGATTTTGAGTGATCCTCAGAAGCGTGCAGTTTATGATCAGTATGGTGAGGAGGGGCTGAAGGGGCAGGTACCACCACCAGGTGGTGGCAGTGACAGCAGTTCTGCGAATTTCCGGTTCAATCCCAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGTTTCTCCAGTTCATTTGGTGGAATGGGGGACATGGGTGGTCGCGCTGGCCCATCTAGCTTTTCCAGGGGCGGCATGTTTGGTGATGATATCTTTGCTCAGTTTAGGAGTGGAGCTGGAGAGGGCTCTGCCCATATGCCAAGGAAAAGTGCACCAATAGAGATAACATTGCTATGTAGCTTGGAGGATTTGTATAAAGGGACAACAAAAAAGATGAAGATTTCGAGGGATGTTATTGATGCCAATGGAAAGCCCACCAAAGTAGAGGAAATCCTTACAATTGAGATCAAACCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGCGAAGGGAAATGAGCAAAGAGGACATATCCCCGCAGACCTTGTGTTCATCATCGACGAGAAGCCGCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTTTCACCCAGAAGGTATCCCTTGTAGAAGCTCTAACAGGTTACACGGTGCAGCTGACAACCCTTGATGGCCGAAACCTTACCATCCCCGTTAATTCAATCATTAGTCCGTCTTACGAAGAAGTCATTAAAGGAGAGGGCATGCCAATTCCTAAAGAACCCTCCAAGAAAGGTAACTTGCGAATCAAGTTCAACATCAAGTTCCCGTCCAGGCTTACATCCGAGCAGAAAAACGGCATTAAGCGATTATTGACATCATATTCGTCTACATGA 879 0.4551 MVVIQFEQILSDPQKRAVYDQYGEEGLKGQVPPPGGGSDSSSANFRFNPRSADDIFSEFFGFSSSFGGMGDMGGRAGPSSFSRGGMFGDDIFAQFRSGAGEGSAHMPRKSAPIEITLLCSLEDLYKGTTKKMKISRDVIDANGKPTKVEEILTIEIKPGWKKGTKITFPAKGNEQRGHIPADLVFIIDEKPHSVFKRDGNDLVFTQKVSLVEALTGYTVQLTTLDGRNLTIPVNSIISPSYEEVIKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKNGIKRLLTSYSST 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02132 292 Pfam DnaJ C terminal domain 113 271 IPR002939 -
Aip04g02132 292 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 8 288 - -
Aip04g02132 292 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 280 IPR008971 GO:0006457|GO:0051082
Aip04g02132 292 MobiDBLite consensus disorder prediction 25 44 - -
Aip04g02132 292 SUPERFAMILY Chaperone J-domain 8 70 IPR036869 -
Aip04g02132 292 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 8 288 - -
Aip04g02132 292 Gene3D - 112 190 - -
Aip04g02132 292 CDD DnaJ_C 111 274 - -
Aip04g02132 292 Gene3D - 192 272 - -
Aip04g02132 292 Gene3D DnaJ domain 5 73 IPR036869 -
Aip04g02132 292 SUPERFAMILY HSP40/DnaJ peptide-binding domain 113 192 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02132 Aip-Chr4 99179929 99183324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02132 K09510 - nnu:104602593 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02132 04 99179929 99183324 Aip04g02132 04 99179929 99183324 ECH
Aip04g02132 04 99179929 99183324 Aip02g02268 02 94710910 94714807 PCT