Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02126 ATGCCATGCTGTGGTAGTGCTCAGCTACTGATATGTGGTGCTCATTCTTTGCTGAATCTCGTTTGGCAAATAATACCTCTAGATTTTTTGCAAGGTGGCAAATTTAGAGTAGCAGCAGATAATTACATTAGGCCTCCCTTAACTAAGGGAGTTCCATCTCTTTTCTCTGATCTTTCGTCTTTGTATAATCACCCTGGGAAGAGATTTGAGATTCATCAAGAGAATAATGAAGGAAGTGGCGGCAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACATGAATGAAGGAGCGGCTATAGGTGATGATGAGGAATTGGAAGAAGAGAATAATAATGAAGCAAAGGAGGAGGAGGAGGATAACAATGAAGAAGGGAATTCAGCAAACCCAAGTAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGACAATATGTGAGATCAAAGATGCTAAGGCTTCGTTGGACTTCTAATCTTCATCTCTCCTTTGTCCATGCTATTCAGAGGCTTGGAGGTCAAGAAAGTAATTCCACTCTCAAACAGTTGTAA 567 0.4145 MPCCGSAQLLICGAHSLLNLVWQIIPLDFLQGGKFRVAADNYIRPPLTKGVPSLFSDLSSLYNHPGKRFEIHQENNEGSGGKSSNDNEGEENSFDMNEGAAIGDDEELEEENNNEAKEEEEDNNEEGNSANPSSSSTASREGKRGSGVRQYVRSKMLRLRWTSNLHLSFVHAIQRLGGQESNSTLKQL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02126 188 Pfam N-terminal acetyltransferase A, auxiliary subunit 25 86 IPR021183 -
Aip04g02126 188 MobiDBLite consensus disorder prediction 100 126 - -
Aip04g02126 188 MobiDBLite consensus disorder prediction 71 149 - -
Aip04g02126 188 Coils Coil 105 128 - -
Aip04g02126 188 Gene3D - 18 137 - -
Aip04g02126 188 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 91 180 IPR044848 GO:0003700
Aip04g02126 188 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 91 180 - -
Aip04g02126 188 Gene3D - 157 187 - -
Aip04g02126 188 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02126 Aip-Chr4 98887899 98889217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02126 148 180 G2-like Transcription Factor Family AT2G42660 72.727 7.70e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02126 K20792 - aip:110265077 172.17