Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02118 atgGATGCTTTGATAAATACTTGGCCATTCGTGGCGGAGGCAGTGGAGGATCCAACAACGGTGCCGTTCAAGAAGGCTAACGGCGACGGAGCGATGAGCTACTACTCAAAAAGGCCGAATATGATAAACTTGTTTGGCAAGGCTATGCGTAGTGTGTCCGTACCATTCATGAGGGAAATGCTAGAGAACTATGATGGATTCAATGGTGTTGAATCATTGGTTGATGTTGGTGGCAACTATGGTGACTGTTTAGAAATGATTATGCAAAGGTACCCTAATATCCGTAAGGGCATCAACTTCGATTTGCCCCATGTCGTTGCTCATGCACCACCTCTTCCAGGAATAATCCATGTAGGTGGTGACGCCCATGAATTTGTTCCCAATGGAGATGCTATATTCTTAAAGTGGCTAGTTACAACATCGACGGACGAGGATACCAAGAAGGTGTTTGAGAATTGTTACAAGGCACTTCCAAATGGAGGGAAATTGATTGTTGTTGAGCCCGTGCTGCCAGAGTCAACGGATGAAAGTCAAAGAACAAGGACATTACTTGGTGCTGACGTGTACAACATGACAATGTACAATCCTAAGGGGAAGCAGAGAACCGAACAACAATTCAAAGATCTTGCCAATTTTGCTGGGTTCTCTTCTTGCCGTGCCTTCTATGTTGATCCTTTCATGTCTGTTCTTGAGTTTCAGAAATGA 705 0.4426 MDALINTWPFVAEAVEDPTTVPFKKANGDGAMSYYSKRPNMINLFGKAMRSVSVPFMREMLENYDGFNGVESLVDVGGNYGDCLEMIMQRYPNIRKGINFDLPHVVAHAPPLPGIIHVGGDAHEFVPNGDAIFLKWLVTTSTDEDTKKVFENCYKALPNGGKLIVVEPVLPESTDESQRTRTLLGADVYNMTMYNPKGKQRTEQQFKDLANFAGFSSCRAFYVDPFMSVLEFQK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02118 234 Gene3D - 33 60 IPR036388 -
Aip04g02118 234 PANTHER OS02G0823400 PROTEIN 2 233 - -
Aip04g02118 234 Gene3D Vaccinia Virus protein VP39 42 220 IPR029063 -
Aip04g02118 234 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 234 IPR016461 GO:0008168
Aip04g02118 234 Pfam O-methyltransferase domain 11 216 IPR001077 GO:0008171
Aip04g02118 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 232 IPR029063 -
Aip04g02118 234 PANTHER O-METHYLTRANSFERASE 2 233 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02118 Aip-Chr4 98399895 98401659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02118 2 234 Monolignol Biosynthesis Gene Families AT3G53140 57.082 2.28e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02118 - - aip:107639549 421.394