Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02109 ATGGCGTCTCACCAACAAGAACCATGGCTTCTTGAGAATGGAAATGTGAAGGTGTTGACCAAGGAAATGCGGCAGGGCCACGGCCGGAGCCGTACTGCCCACAACATGTCCTCCTCTTCTCTTAGGAAGAAATCCGACCGGACCCTCGTATCGAAGGTTCGGTGCGGATTGCTAAGGAATTTGTTGGTTAACATCCAAGAAGTTATTCTGGGGACAAAGTTGTCCATCTTGTTCCCTGCAATTCCCATTGCCATCATTGCCCAATGCTATGGCCTTGGAAGACCATGGATTTTCGCATTGAGCTTACTTGGGCTTACACCGCTTGCTGAACGTGTCAGCTTCCTCACAGAACAAGTTGCAATTTACACTGGTCCTACAGTTGGAGGGCTTCTAAATGCAACATGTGGAAATATTACTGAGCTGGTCATAGCAATATTTGCACTGAGTAGTAACAAAGTTGATTTGGTGAAGTATTCTCTACTGGGTTCTATCCTCTCAAACCTTCTGCTGGTTCTTGGAACCTCTCTCTTGTGTGGTGGCATTGCAAACCTTGCAAAGGAACAAAAATATGACAGAAGACAAGCAGATGTGAACTCTCTAATGCTTCTGCTGGCATTGACATTGTTTGAAGCTGAAGATGAGGATGGAGATGGTGAGAATGGTTCAGATGATGAAGAAGCTGTGATTGGAGTGTGGAGTGGTGTTGCATGGCTGGCTGGGATGACTGTCTTCATTGCCTTGTTATCTGAATATGTGGTGGACACAATTGAGGAAGCATCAGAGTCATGGGGTCTTTCTGTAAGCTTTCTCAGCATAATTTTGCTACCAATTGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGATGGTACATCTCACTACATGAAAGGGCTTATTCTTCTTTTGTGCTACGTTGTCATTGGTGCTTGCTTCTTTGTACAAAGAACACCCTTAAACCAAGTGAATGTTAACAACACATTCAAGTCAGGAAGTGATGCAGTTTTAAGTGCTTAA 1038 0.4441 MASHQQEPWLLENGNVKVLTKEMRQGHGRSRTAHNMSSSSLRKKSDRTLVSKVRCGLLRNLLVNIQEVILGTKLSILFPAIPIAIIAQCYGLGRPWIFALSLLGLTPLAERVSFLTEQVAIYTGPTVGGLLNATCGNITELVIAIFALSSNKVDLVKYSLLGSILSNLLLVLGTSLLCGGIANLAKEQKYDRRQADVNSLMLLLALTLFEAEDEDGDGENGSDDEEAVIGVWSGVAWLAGMTVFIALLSEYVVDTIEEASESWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDGTSHYMKGLILLLCYVVIGACFFVQRTPLNQVNVNNTFKSGSDAVLSA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02109 345 Gene3D - 125 338 IPR044880 -
Aip04g02109 345 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 206 - -
Aip04g02109 345 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 207 297 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aip04g02109 345 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 297 333 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aip04g02109 345 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 207 297 - -
Aip04g02109 345 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 297 333 - -
Aip04g02109 345 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 206 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aip04g02109 345 Pfam Sodium/calcium exchanger protein 96 207 IPR004837 GO:0016021|GO:0055085
Aip04g02109 345 Pfam Sodium/calcium exchanger protein 235 333 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02109 Aip-Chr4 97965735 97968964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02109 1 297 Antiporters AT2G38170 57.746 1.03e-127 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02109 K07300 - gmx:100779440 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02109 04 97965735 97968964 Aip04g02109 04 97965735 97968964 ECH
Aip04g02109 04 97965735 97968964 Aip02g02260 02 94528454 94533718 PCT