Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02108 ATGCCGCCACACCTCTTCGCTCTGCTGCCACCGTGTCGTTACTCTGCTGCTCCAACACCCGTCGTCGCCCCGTCGCACTCGCGCCGCCGTCCCTCCGTCCCCTGTTTCAAATCGAAACACGTTGTATCAATAAGCGTTTCAGAGATGTCAATTATCGGAGAAGATATGCAGACTCTCGATGATTCTCGCTTGATCTACGTCTTCCTCTCTTCGAGTCTCAAGTCTAATGTATACAACTTTGGAGTAATATTATGGGAACCTACAACCGAAAAGATCCCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCCGTGGGGTTCATGGATCAGCGACTTGAAATTCCAAAAGATCTTTTAGCTTCACAACAATCAACAGTGACAGGGGAGTTGAATTTGAAGGTTTTGATGCCTATACCGAAGCCAACAGGTTATGCAGGAGACGATCCTTATAAAATTTGGCAATGGCTTTCGAGTTTGCAAGCATGTTGTGTGGTGTTTCCTCCTCAGAATGACGGTGGCAGATGCTATCACAATACTCAAGTCCTTTGTTCCCATGCCCATGAGCTTCAATAA 576 0.4688 MPPHLFALLPPCRYSAAPTPVVAPSHSRRRPSVPCFKSKHVVSISVSEMSIIGEDMQTLDDSRLIYVFLSSSLKSNVYNFGVILWEPTTEKIPWDNLNSMQVIGAVGFMDQRLEIPKDLLASQQSTVTGELNLKVLMPIPKPTGYAGDDPYKIWQWLSSLQACCVVFPPQNDGGRCYHNTQVLCSHAHELQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02108 191 PANTHER RGS DOMAIN-CONTAINING SERINE/THREONINE-PROTEIN KINASE A-LIKE ISOFORM X1 73 125 - -
Aip04g02108 191 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 125 - -
Aip04g02108 191 Gene3D Transferase(Phosphotransferase) domain 1 54 139 - -
Aip04g02108 191 SUPERFAMILY Protein kinase-like (PK-like) 72 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02108 Aip-Chr4 97929611 97931919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02108 70 119 MAP Kinase Kinase Kinase AT3G06640 76.000 4.11e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02108 - - aip:107639169 290.812