Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02106 ATGGCAGGTCCAGAGGTTGATGCAAATGGGAATGGCTCATTGAAGTTGAAGCCAAGTGAGAGCAGAGGAAAGAACATCCAATGCAGAGCTGCGGTGGCTTATGGTCCTGGAGAACCCTTTGTGGTGGAACAAGTTATTGTTCATCCTCCTCAGAAAATGGAGGTTCGGATCAAGATCCTCTACACTTCAATATGTCATACCGATCTAGCATGTTGGAAAGCTGAGAATGAAGCTCAGCGCGCTTTTCCTCGGATTTTTGGCCATGAAGCTTCCGGGGTTGTGGAGAGTGTGGGAGAAGGAGTAACAGACATAAGAGAAGGGGACATAGTGGTGCCAATATTCAACGGAGAATGTGGAGAATGCTGTTACTGCAAGAGTTCCGTAACAAACATGTGTGAGAGGTTTGGCGTGAACCCAATGAAGAAGGTTATGGAAAGTGATGGAAAAAGCAGGTTCACAACGGTTCAAGGAAAACCCATTTACCATTTCTTGAACACATCAACTTTTGCTGAGTACACCGTCGTTGACTCTGCTTGTGTGGTCAACATCAACCCTCAACTCGCTCCAACCCTCAAACAACTTACCCTCATCAGTTGCGGTGTCTCCACCGGAGTTGGAGCTGCTTGGAACAGTGCAAATGTGCATGCTGACTCCACTGTTGCAGTTTTTGGCTTAGGTGCTGTGGGGCTTGCTGTTGCAGAAGGGGCACGAGCTAGGGGTGCATCAAAAATAATAGGTGTGGACATTAATCCAGACAAATTCATCAAAGCCCAAGCTATGGGAGTCACCGATTTCATAAATCCAAGAGATGAAGAGAAACCAGTGAATGAGAGAATCAAGGAAATGACCGGAGGAGGTGTAGATTACAGTTTTGAATGTGCTGGCAACTTGGACGTTCTAAGGGAAGCCTTCTTGTCTGCCCACGAGGGTTGGGGATTGACTGTAGTACTCGGAATTCACTCAAAACCAGAATTGCTTCCAATTCACCCAATGGAGCTGTTCAATGGTCGCAGAATGATAGGATCAGTTTTTGGAGGTTTCAAAGGGAAAACCCAGTTGCCTCATTTTGCCAATGAATGCATGCATGGAGTGGTGAATCTAAACAAGTTCATCACACACGAGCTTCCATTTGATGAGATTAACAAAGCCTTTGATCTTCTGATTGCTGGAAAATCACTGAGATGTATCCTACACCTCTAA 1200 0.4575 MAGPEVDANGNGSLKLKPSESRGKNIQCRAAVAYGPGEPFVVEQVIVHPPQKMEVRIKILYTSICHTDLACWKAENEAQRAFPRIFGHEASGVVESVGEGVTDIREGDIVVPIFNGECGECCYCKSSVTNMCERFGVNPMKKVMESDGKSRFTTVQGKPIYHFLNTSTFAEYTVVDSACVVNINPQLAPTLKQLTLISCGVSTGVGAAWNSANVHADSTVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTDFINPRDEEKPVNERIKEMTGGGVDYSFECAGNLDVLREAFLSAHEGWGLTVVLGIHSKPELLPIHPMELFNGRRMIGSVFGGFKGKTQLPHFANECMHGVVNLNKFITHELPFDEINKAFDLLIAGKSLRCILHL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02106 399 Gene3D - 204 342 - -
Aip04g02106 399 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 21 398 - -
Aip04g02106 399 SUPERFAMILY GroES-like 349 398 IPR011032 -
Aip04g02106 399 SUPERFAMILY GroES-like 22 218 IPR011032 -
Aip04g02106 399 PANTHER ALCOHOL DEHYDROGENASE 21 398 - -
Aip04g02106 399 Pfam Zinc-binding dehydrogenase 227 347 IPR013149 -
Aip04g02106 399 Gene3D - 31 394 - -
Aip04g02106 399 Pfam Alcohol dehydrogenase GroES-like domain 54 182 IPR013154 -
Aip04g02106 399 MobiDBLite consensus disorder prediction 1 21 - -
Aip04g02106 399 CDD alcohol_DH_plants 26 398 - -
Aip04g02106 399 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 87 101 IPR002328 GO:0008270|GO:0016491
Aip04g02106 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 192 363 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02106 Aip-Chr4 97885003 97896768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02106 54 388 Monolignol Biosynthesis Gene Families AT2G21890 27.826 1.08e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02106 K00001 - gmx:100787307 603.208