Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02096 ATGATGATGGCCGGTTTGCAAGAGGAGGATGGAAGGCTTAGCTTTGGGTATTCAAGCTTCAAAGAGGAAGAAAGTATCGATGAGGATTTTCACGATATTAAAACATTGAAAATTGGTGGTCATTCAGTATGCTTACTTGGAGTATTTGATGGTCATGGTGGTTTTCGTGGTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATTTTTACTGATGCCAAATTGGCTATAA 249 0.3815 MMMAGLQEEDGRLSFGYSSFKEEESIDEDFHDIKTLKIGGHSVCLLGVFDGHGGFRGAEYLKEHLFDNLMKHPKFLLMPNWL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02096 82 Gene3D - 4 80 IPR036457 -
Aip04g02096 82 PANTHER PROTEIN PHOSPHATASE 2C 55-RELATED 3 76 - -
Aip04g02096 82 PANTHER PROTEIN PHOSPHATASE 2C 3 76 IPR015655 GO:0004722|GO:0006470
Aip04g02096 82 SUPERFAMILY PP2C-like 11 75 IPR036457 -
Aip04g02096 82 ProSitePatterns PPM-type phosphatase domain signature. 45 53 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02096 Aip-Chr4 97518484 97518732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02096 4 76 PP2C-type Phosphatase Gene Family AT5G53140 61.644 2.33e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02096 K17506 - gmx:100813138 115.161