LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip04g02085	ATGGAGTCACGGTCACGGAGAGAGGCAGAGAGTAGAGCTTCTTCTTCTCCGACTCCTGAGAAAATCCGCCGTCCTCCACCTGAGAGCAGAGCTGCTTCTTCTTCTTCTTCTCCTCCTCCACCGAGCCCACCACCGCGCCATCCTCTTCATGGCCTAGAGAGAAGCTCAATTGGAGTCTCAGATTTAAGATTATTTTGGAAATTGCCGAGTGACTTTGCTATCTTCATGAGGGATGTCAAAGAAGGATCATTCACAAGGATATCAAGGCTTCTAATATTCTTCTCTCTGAGACTTTTGAGCCTCAGGTACCTTCCCCCTGAATTCTTCATGCATGGAATAGTAGATGAGAAAACTGATGTATATGCTTATGGTGTGCTATTATTGGAGCTAATCACTGGAAGACAAGCTTTGGATAGCTCACAAAAAAGTCTTATCATGTGGGCAATGATAAATGATATATTCGCTCACCGCAAGCCTGCAAGGGTTTTTGGAAGTGTTTTCTATTGCATGTTACTGGCAAGTTCAAATCTGTTCTTTGTTTTAATTAATCGATTGTTGGCTGATTGA	567	0.4339	MESRSRREAESRASSSPTPEKIRRPPPESRAASSSSSPPPPSPPPRHPLHGLERSSIGVSDLRLFWKLPSDFAIFMRDVKEGSFTRISRLLIFFSLRLLSLRYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLIMWAMINDIFAHRKPARVFGSVFYCMLLASSNLFFVLINRLLAD	188

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip04g02085	188	Gene3D	Transferase(Phosphotransferase) domain 1	71	173	-	-
	Aip04g02085	188	SUPERFAMILY	Protein kinase-like (PK-like)	93	154	IPR011009	-
	Aip04g02085	188	MobiDBLite	consensus disorder prediction	32	48	-	-
	Aip04g02085	188	MobiDBLite	consensus disorder prediction	1	52	-	-
	Aip04g02085	188	PANTHER	OS08G0249100 PROTEIN	102	148	-	-
	Aip04g02085	188	Pfam	Protein tyrosine and serine/threonine kinase	99	161	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip04g02085	Aip-Chr4	96942197	96946493	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip04g02085	68	148	Trihelix Transcription Factor Family	AT5G38560	38.372	2.23e-11	60.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Aip04g02085		PK_Tyr_Ser-Thr	2.7e-07	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip04g02085	-		-	aip:110271812	188.734