Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02076 ATGCTTGTATGCGGGATAGGTACTGGTGGTACCATCACTGGTGCAGAAAAATATCTGAAAGAGAAGAATTCCAACATAAAGGTGGATTTGACACCGCACATGCAGCTGCTCGGTGATGCTTATGATAGAGCAGCAATTAAGTTCCACGGAGTGGAGGCTGACATTAACTTCAACATAGAAGACTACGAAGAAGACTTGAAGCAGATGACGAATTTGACAAAGGAAGAATTTGTGCACGTGCTTCAGCGACAAAGCACTGGGTTTCCAAGAGGAATTTCCAAATATAGAGGCGTTACCTTGCACAAGTGCTTAGGAAGAGCCTGTGGTGAGTATCATACATGTGCTTTGACAGATTCTGGTGAAGTATATGCATGGGGGAATGATGTTTGTTGTTCGGATTTGGTTAATAAAGGCTGGATAAAAAATCAATGGATACCACATAAACTTTCAGGTCCTCTAGATGGTATTAGCATTTCAACCATTGCTTGTGGAGAATGGCACACTGCCATTGTCTCTAGCTGTGGAAATTATTTACATATGGAGATGGTACCTTCGGAGTTCTTGGCCATGGCAATCTTCAGAGCTGTTCTCGACTGA 597 0.4271 MLVCGIGTGGTITGAEKYLKEKNSNIKVDLTPHMQLLGDAYDRAAIKFHGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLQRQSTGFPRGISKYRGVTLHKCLGRACGEYHTCALTDSGEVYAWGNDVCCSDLVNKGWIKNQWIPHKLSGPLDGISISTIACGEWHTAIVSSCGNYLHMEMVPSEFLAMAIFRAVLD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02076 198 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 40 105 - -
Aip04g02076 198 Pfam Regulator of chromosome condensation (RCC1) repeat 107 130 - -
Aip04g02076 198 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 120 174 IPR000408 -
Aip04g02076 198 Gene3D - 1 33 IPR036052 -
Aip04g02076 198 PANTHER FLORAL HOMEOTIC PROTEIN APETALA 2-LIKE ISOFORM X1 40 105 - -
Aip04g02076 198 SUPERFAMILY RCC1/BLIP-II 99 177 IPR009091 -
Aip04g02076 198 Gene3D - 67 179 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02076 Aip-Chr4 96529380 96530974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02076 46 103 AP2-EREBP Transcription Factor Family AT4G36920 89.655 5.91e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02076 K09284 - adu:107481014 150.214