Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g02071 | ATGCAACTCAAGAAGGCACTGTTTGGTTGTTACATGGCTTTTTTCTCTTCTGACACCATCAAAGGCATGTCCAAGGAGATTCAATTCCCAGAAATTCCTTCTCTGCCTGTGGCCAGGTTCCAGAATTTGCAGTGTCTAGGAGAAGATGATGATGAGACTTGCTCCATTTGCTTGGTGGAGTTTGAAGATGAAGATGCTGTGAGCAAGCTTAGAAGATGTAACCACATATTCCATCTTAGTTGCATTCAGCAATGGATAGAGCGAAATCAATTCTCATGCCCATTTTTGTCGGCGAGGCAACTCCCACCAGCCACGAACGACGCGCGCAACGGAGATTGGGCGCTGCAGTTCGGGACGACGCTGATGGACGAAGCAGTTGCTGCCAGTGATGGTAGAGGCGCACGAAGGAGACTAGGCGCTACAGTTCTGAACGGTGCCGACGCAGGTTCCAGGTCAGGTGGAGGCGCAGGGATTGGATGTTCAGCGGCAAAGGAGGAGGGTTTTTGGGGGTAG | 513 | 0.5088 | MQLKKALFGCYMAFFSSDTIKGMSKEIQFPEIPSLPVARFQNLQCLGEDDDETCSICLVEFEDEDAVSKLRRCNHIFHLSCIQQWIERNQFSCPFLSARQLPPATNDARNGDWALQFGTTLMDEAVAASDGRGARRRLGATVLNGADAGSRSGGGAGIGCSAAKEEGFWG | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g02071 | 170 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 2 | 96 | - | - | |
Aip04g02071 | 170 | SUPERFAMILY | RING/U-box | 47 | 94 | - | - | |
Aip04g02071 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 54 | 94 | IPR001841 | - | |
Aip04g02071 | 170 | SMART | ring_2 | 54 | 96 | IPR001841 | - | |
Aip04g02071 | 170 | Pfam | Ring finger domain | 53 | 95 | IPR001841 | - | |
Aip04g02071 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 16 | 101 | IPR013083 | - | |
Aip04g02071 | 170 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 2 | 96 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g02071 | Aip-Chr4 | 96348850 | 96351398 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g02071 | 48 | 112 | C3H Transcription Factor Family | AT4G38140 | 41.791 | 4.89e-15 | 66.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g02071 | - | K16281 | mtr:MTR_1g115270 | 116.701 |