Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02052 ATGACTCTTTTGCCTTGTGAACATGGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGATAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCATAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGATTTATAGGCTCAGCGTGGAGCCTGATCGGTCAGCATATTCCGAGATCTCCGCGAGTGGATTGATCCGGATATGCTGGCAAGTACGTTGGCTCCGTGATTCGAGTATATGGATGGTTTTCGAAAGGCGACCGTTGCGTCGAGCTGGTTTCTCTGGATATCTACTTATCTAG 432 0.4375 MTLLPCEHGDGAGDDLFKELWRLCAGPLMDVPCVQDRVFYFPQGHIELLPEPTEQDLRQMKNHKSPKYDLPSNKIFKEQDFFLFYQKIYRLSVEPDRSAYSEISASGLIRICWQVRWLRDSSIWMVFERRPLRRAGFSGYLLI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02052 143 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 73 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip04g02052 143 PANTHER AUXIN RESPONSE FACTOR 11 10 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02052 Aip-Chr4 95319206 95321632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02052 10 72 B3 DNA Binding Superfamily AT1G43950 46.032 1.54e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02052 K14486 - ahf:114925841 137.502