Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02000 ATGTCACCACCAAACCAAGAAACGATGCAAGAAATGCCAAATATGCCAAATATGCAGATGAGCTTCTATTGGGGGAAACATGGTACTGTACTTTTCTCTGGCTGGCCAAAAAGTGGTGGCATGTACACATTGGCACTCTTCTTTGTGTTCTTCTTATCAATGGCAATTGAGATTCTCTCCAACCAGCCGCCAATACGGCGCGGGGCTAGACCGGCTTCTGGGGTAACGGCTCAGGCCGTTGTGTACTTCTTCCGAATCAGCTTCATCTACTTGGTCATGCTTGCTGTCATGTCCTTCAATGGAGGAATCTTCATAGCTGCTATTCTTGGTCACTCCTTGGGATTCTTCTTAGCCAAGTTTCGAGCTGTTGCCATGGCCAACAGGGAACCCTCTGATCTTGAACAAAAAGTTTGA 414 0.4686 MSPPNQETMQEMPNMPNMQMSFYWGKHGTVLFSGWPKSGGMYTLALFFVFFLSMAIEILSNQPPIRRGARPASGVTAQAVVYFFRISFIYLVMLAVMSFNGGIFIAAILGHSLGFFLAKFRAVAMANREPSDLEQKV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02000 137 PANTHER CTR FAMILY COPPER TRANSPORTER 8 130 - -
Aip04g02000 137 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 8 130 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip04g02000 137 Pfam Ctr copper transporter family 71 117 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02000 Aip-Chr4 92624986 92625612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02000 21 117 Inorganic Solute Cotransporters AT5G59030 50.980 1.81e-26 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02000 K14686 - gmx:100813144 151.754