Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01999 ATGGCATCAATCACCGCGGCAGAGGGCGTGCCGGCACCGTATAACTCCACGGTGGCGACTCGGCTAGGCCGGAGAAGAATTCCGATCCACACCAGCTTCTATTGGGACCACAAGGTAGACATACTTTTCCGGTGCTGGCCGGGCGACAGCGTGGGCATGTATGTGGTGGCGCTGATGCTGGTGTTCGCAATGGCGGTGCTGGTAGAGTGGCTTTCGTTCACCAACATAGTGAAGCTCAAGCCAGGGGGCTCAAACGACGTCGTTGGGGGGCTATTGAAGACGGGGCTATACGGCGTGCGTTCCGGGCTCTCTTACTTGGTGATGCTGGCCGTTATGTCGTTTAACGGTGGGGTTTTTATCGTCGCAATTGGTGGCCACGTCATCGGGTTCTTGATTTTCGGTACTCGAGCGTTCAGAAGGAAGACGGCTGTACCGGACTCGTCTAAGCCGTTGGATTTGCGAGTTCAGTAA 471 0.5626 MASITAAEGVPAPYNSTVATRLGRRRIPIHTSFYWDHKVDILFRCWPGDSVGMYVVALMLVFAMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFIVAIGGHVIGFLIFGTRAFRRKTAVPDSSKPLDLRVQ 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01999 156 Pfam Ctr copper transporter family 91 133 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip04g01999 156 Pfam Ctr copper transporter family 32 74 IPR007274 GO:0005375|GO:0016021|GO:0035434
Aip04g01999 156 PANTHER COPPER TRANSPORTER 4 5 143 - -
Aip04g01999 156 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 5 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01999 Aip-Chr4 92612638 92613108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01999 32 142 Inorganic Solute Cotransporters AT5G59030 47.748 3.70e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01999 K14686 - gmx:100803410 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01999 04 92612638 92613108 Aip06g01540 06 27259110 27262113 ECH
Aip04g01999 04 92612638 92613108 Aip04g01999 04 92612638 92613108 ECH
Aip04g01999 04 92612638 92613108 Aip03g00465 03 4532314 4535370 ECH