Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip04g01997 | ATGGTTGAGTCAACAACAAATGCATTGATGACGATGATGATGGAGGAGGAGGAAGTCATACTAATGTCTTCTAATTCTAATTCCAATTCTTCTTGTTCAGAAGGGTCAGAGGATGATGACCTTGTTAAAGAGCTTTTAGATGATGCCACTCCTCTTCTTCTTCCGCCTTCGGACCACTACAACTCAATAATAAGGCCGCCGCCTTCTTATTTTTCAAATACCGATGATGGTGACGGTGATGATTATGACCACGCCATTAACAGGTTCATATCCAACATTTACTCAGGTCCTACAATCTCAGACTTTGAAAATGCTTTGTCAGTGATCAATAATAGTGACAACCACCCAAGCGATCAGCATTTGGAACACCTCTCATCAGCAAGGGTTTCCATATTGGAAAGGGGTTTGAGTAAAATTGAGAACAAGTATACGCTCAAATTCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGTCAAAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGATGCACGAATCCAAGGTGCAGTGCAAAGAAGCAAGTTGAGAGATCCAATGAGGACCCAGACACACTTATCATCACTTACGAAGGTCTTCACTTGCACTTTGCCTACCCTCATTTTCTCACAGGACAACCACACCCACAATCAGATCCTCCAATCAAGAAGCCCAAGCCCATGCCTATAGCTTCACCAGAAAATAGAGTCCAAGAAATTCTAGAAGCCAAGGATGTCCAAGCCAACTCTACTTTGGGCTTAATTCAAACAACTTTAACTGACTCCCAAGAAGATATGGCCAATGTTAATTTGGGCTCACAAGGCCTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCCCATAACAATGGCAATAGCACTAACTCACTTTTTTCTTCTTCTTCTCAACCAACTACACCTCCTTCGCTGTGGTTTCCAAATTATTCAACGTCCTGTCATACCGTTGGCTTGAATTTTAGCAATAAGTGTATAAATATGTAA | 1032 | 0.4157 | MVESTTNALMTMMMEEEEVILMSSNSNSNSSCSEGSEDDDLVKELLDDATPLLLPPSDHYNSIIRPPPSYFSNTDDGDGDDYDHAINRFISNIYSGPTISDFENALSVINNSDNHPSDQHLEHLSSARVSILERGLSKIENKYTLKFKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPHFLTGQPHPQSDPPIKKPKPMPIASPENRVQEILEAKDVQANSTLGLIQTTLTDSQEDMANVNLGSQGLLEDMVPFMVRNPHNNGNSTNSLFSSSSQPTTPPSLWFPNYSTSCHTVGLNFSNKCINM | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip04g01997 | 343 | ProSiteProfiles | WRKY domain profile. | 150 | 215 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g01997 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR 49-RELATED | 32 | 306 | - | - | |
Aip04g01997 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 32 | 306 | IPR044810 | GO:0003700 | |
Aip04g01997 | 343 | SMART | WRKY_cls | 155 | 214 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g01997 | 343 | Gene3D | WRKY domain | 151 | 208 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g01997 | 343 | Pfam | WRKY DNA -binding domain | 156 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip04g01997 | 343 | SUPERFAMILY | WRKY DNA-binding domain | 153 | 212 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip04g01997 | Aip-Chr4 | 92558158 | 92561061 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip04g01997 | 63 | 296 | WRKY Transcription Factor Family | AT5G43290 | 42.578 | 1.37e-47 | 160 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aip04g01997 | WRKY | 7.1e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip04g01997 | - | - | aip:107637904 | 645.966 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip04g01997 | 04 | 92558158 | 92561061 | Aip04g01997 | 04 | 92558158 | 92561061 | ECH |