Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01997 ATGGTTGAGTCAACAACAAATGCATTGATGACGATGATGATGGAGGAGGAGGAAGTCATACTAATGTCTTCTAATTCTAATTCCAATTCTTCTTGTTCAGAAGGGTCAGAGGATGATGACCTTGTTAAAGAGCTTTTAGATGATGCCACTCCTCTTCTTCTTCCGCCTTCGGACCACTACAACTCAATAATAAGGCCGCCGCCTTCTTATTTTTCAAATACCGATGATGGTGACGGTGATGATTATGACCACGCCATTAACAGGTTCATATCCAACATTTACTCAGGTCCTACAATCTCAGACTTTGAAAATGCTTTGTCAGTGATCAATAATAGTGACAACCACCCAAGCGATCAGCATTTGGAACACCTCTCATCAGCAAGGGTTTCCATATTGGAAAGGGGTTTGAGTAAAATTGAGAACAAGTATACGCTCAAATTCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGTCAAAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGATGCACGAATCCAAGGTGCAGTGCAAAGAAGCAAGTTGAGAGATCCAATGAGGACCCAGACACACTTATCATCACTTACGAAGGTCTTCACTTGCACTTTGCCTACCCTCATTTTCTCACAGGACAACCACACCCACAATCAGATCCTCCAATCAAGAAGCCCAAGCCCATGCCTATAGCTTCACCAGAAAATAGAGTCCAAGAAATTCTAGAAGCCAAGGATGTCCAAGCCAACTCTACTTTGGGCTTAATTCAAACAACTTTAACTGACTCCCAAGAAGATATGGCCAATGTTAATTTGGGCTCACAAGGCCTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCCCATAACAATGGCAATAGCACTAACTCACTTTTTTCTTCTTCTTCTCAACCAACTACACCTCCTTCGCTGTGGTTTCCAAATTATTCAACGTCCTGTCATACCGTTGGCTTGAATTTTAGCAATAAGTGTATAAATATGTAA 1032 0.4157 MVESTTNALMTMMMEEEEVILMSSNSNSNSSCSEGSEDDDLVKELLDDATPLLLPPSDHYNSIIRPPPSYFSNTDDGDGDDYDHAINRFISNIYSGPTISDFENALSVINNSDNHPSDQHLEHLSSARVSILERGLSKIENKYTLKFKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPHFLTGQPHPQSDPPIKKPKPMPIASPENRVQEILEAKDVQANSTLGLIQTTLTDSQEDMANVNLGSQGLLEDMVPFMVRNPHNNGNSTNSLFSSSSQPTTPPSLWFPNYSTSCHTVGLNFSNKCINM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01997 343 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g01997 343 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 32 306 - -
Aip04g01997 343 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 306 IPR044810 GO:0003700
Aip04g01997 343 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g01997 343 Gene3D WRKY domain 151 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip04g01997 343 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip04g01997 343 SUPERFAMILY WRKY DNA-binding domain 153 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01997 Aip-Chr4 92558158 92561061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01997 63 296 WRKY Transcription Factor Family AT5G43290 42.578 1.37e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip04g01997 WRKY 7.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01997 - - aip:107637904 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01997 04 92558158 92561061 Aip04g01997 04 92558158 92561061 ECH