Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01993 ATGCTCCCTCCACCACTGCAAACCCCTAACCCCTTCTGCCGCCGCTCCCTTTCGTCGGAGCATTGGAGAAGGTTTGTTGTTCAGGGCCGCTCCCTTCCGTCGCTCGAAAGAAACCCTTCCTCGTGCAGGGCCGAGCTAGTTTTGAGACCTTTGCCACCACCTGCATTGCTTCAATTCTGGTTTTGTAAGCTGGTCCCGAAACCAAGGACCATTTCTATTGCAGCATCTGTAGAGGATGAAGATAAGTTTGAGTCTACTGTCATTGAGGATGAAAGCGGGCTTGAATTAAGAAGCTTTGAGGTCATTGATGATGCAAAGACGCAGCTCGAGGCTGTCTGCCCTAATGTGGCATCTTGTGCTGATATCCTTGCCCTTGCAGCCCGTGATTCCATTGTTCTAAAACATATGTTTTCGGCATTAGGACTCAACACAAAAGATCTTGTTACCTTTGTTGGTGGACACACAATTAGCACTACAAGTTTTGGGCTTTTGAGAAGAAGGCTATACAATTTCAACGGAACAAATGGTCCTGACCCGACCATTGACCCTTCATTTCTTCTTCAATTACAAGTACTTTGCCCTCAGAATGGTGGAGCTTCTAGTAAGCGAGTGCCTCTAGATAATGGTAGCCAAACCAAATTTGACACATCTTACTTTAATAATGTGAAGAAGGGCAGGGGAATTCTGCAATCTGATCAGGCACTATGGACTGATCCTTGCACAAAGGCACTTGTGCAAAGGTACTCACTTGGATTAACCTTTAATGTTGACTTTGGAAATTCTATGGTCAAGATGAGCAACATTGGTGTCCAGACAGGTTCTGAAGGTGAAATCTGCAAGAAATGCTCTACTTTTACATGA 861 0.453 MLPPPLQTPNPFCRRSLSSEHWRRFVVQGRSLPSLERNPSSCRAELVLRPLPPPALLQFWFCKLVPKPRTISIAASVEDEDKFESTVIEDESGLELRSFEVIDDAKTQLEAVCPNVASCADILALAARDSIVLKHMFSALGLNTKDLVTFVGGHTISTTSFGLLRRRLYNFNGTNGPDPTIDPSFLLQLQVLCPQNGGASSKRVPLDNGSQTKFDTSYFNNVKKGRGILQSDQALWTDPCTKALVQRYSLGLTFNVDFGNSMVKMSNIGVQTGSEGEICKKCSTFT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01993 286 Pfam Peroxidase 133 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 PANTHER PEROXIDASE 25-RELATED 93 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 SUPERFAMILY Heme-dependent peroxidases 96 285 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 ProSiteProfiles Plant heme peroxidase family profile. 54 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 Gene3D - 89 134 - -
Aip04g01993 286 PANTHER PEROXIDASE 93 133 - -
Aip04g01993 286 Gene3D - 266 284 - -
Aip04g01993 286 PANTHER PEROXIDASE 25-RELATED 134 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 PANTHER PEROXIDASE 134 284 - -
Aip04g01993 286 Gene3D Peroxidase, domain 2 135 265 - -
Aip04g01993 286 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip04g01993 286 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01993 Aip-Chr4 92297815 92299596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01993 94 283 Peroxidase AT5G64120 52.863 4.82e-71 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01993 K00430 - gmx:100820620 235.728