Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01985 ATGGTATATAAATCTTCACCTGGTGAGATGAAACTTGAGGAAGATCTCGGCCCGGATCGGGAGGACGACTTCCAAACTGACGACGAAGAAAACCAGGGGAACAGGGTGTTTGATAATTTGGATGATGATTCTGAATCGGATTCATCAGTTCTTTCGCAAAAATTGTCCAATGATAATATCATGCCTTCTTGGCCTCAAAGCTATCGGCAATCCATGGACATGTTAACGAGTGTAACACCACCTGGAATTAGTTTCCTAAGGCGAATTGGATCAAAAGGAAGTAGTAATAATCAGTATTTGACTACAGCATTCAAGAGATCTCAAGAATGGAAGCAAGAGGATTCTTCTTTGGCTAAACCTCTTGTCTCGGATCAACTAAAAGAAGTGGAGAATGGTGTTTCAGAAGAACAACCTGCGAGACAGCAGTCAAGTGTATTTCAACATTCCAAGTTTTCTCTTGATGATTTGCCACCACCACAACACCAATGTTCATTTGCACAATCAGTTATTAATGGAACGAATATATTATGTGGGATAGGACTTCTTACGATTCCATATGCAATAAAAGAAGGAGGATGGTTGAGCCTTACAATCCTTGTATTATTTTCTATCATTTGTTGTTATACTGGAATTTTACTGAAAAGATGTTTGGAAAGCAACCCTGGACTCAAAACATATCCAGATATCGGCCAAGCAGCCTTTGGAGTAGTCGGTCGCTTAGGAATTGCGATATTCTTATACATGGAATTGTACGCAGCTGCTGTTGAGTTTATAACACTAATGAGTGATAACCTCTCATCACTGTTTCCTAATGTCCACATCAAAGTTGGTGGGATAGATTTGGAGACTCATGTGTTTTTTGCAATCACTGCAGCTCTTATGGTTCTTCCTACTGTTTGGCTTCGAAATCTAAGCCTTCTTTCTTATATCTCAGCTGGAGGAATATTTGCAACAATAATGGTGACATTATGCTTGTTTTGGGTTGGGTTGGTTGAACATGTTGGATTGAAACCAGGAAGAAAACTTTTAGACCTTGAAAACATTTCTGTATCAGTTGGTCTATATGGTTTTGGTTTTGCTGGCCATGCTGTTTTCCCAAATGTCTACTCTTCTATGCAGGATCCATCAAGATTCCCATCAGTTTTATATCTTAGTTTTGCCTTTTGTCTTTTTATGTACATGAGTGTTGGTGCAGTTGGATATTTAACTTTTGGCGAGTCAGTTGAGTCTCAATTTACCTTAAACATGCCCAAAGAGTTATATGCATCAAAGATTGCAACCTGGACAACTGTTATAACACCATTGGCAAAATATGCACTAACGATATTACCCATTGCATTGAGTATAGAGGAACTTATCCCTAACAACAAGCTAAGATGTCATGCCACAGCTATTGCTATTAGAACATTTTTAGTGATTTCAAGTTTGGTTGTGGCCCTCTCTGTTCCTTATTTCGGTGCTTTGATGGCGCTAATTGGTGCTTTTATGTCAATGACAGTTGCACTTATTTATCCTTGTGCGTGTTATCTAAAGATACACAACGGTAGATTATCAAAACTTGAGATAACAAAGTGTGTGTTAGTTATTATTGTGGGGGTGCTAAGCTCTATCGTTGGAACATATTCTGCTCTTTTAAGAATAGCTAATGGAGACGACTAA 1659 0.3864 MVYKSSPGEMKLEEDLGPDREDDFQTDDEENQGNRVFDNLDDDSESDSSVLSQKLSNDNIMPSWPQSYRQSMDMLTSVTPPGISFLRRIGSKGSSNNQYLTTAFKRSQEWKQEDSSLAKPLVSDQLKEVENGVSEEQPARQQSSVFQHSKFSLDDLPPPQHQCSFAQSVINGTNILCGIGLLTIPYAIKEGGWLSLTILVLFSIICCYTGILLKRCLESNPGLKTYPDIGQAAFGVVGRLGIAIFLYMELYAAAVEFITLMSDNLSSLFPNVHIKVGGIDLETHVFFAITAALMVLPTVWLRNLSLLSYISAGGIFATIMVTLCLFWVGLVEHVGLKPGRKLLDLENISVSVGLYGFGFAGHAVFPNVYSSMQDPSRFPSVLYLSFAFCLFMYMSVGAVGYLTFGESVESQFTLNMPKELYASKIATWTTVITPLAKYALTILPIALSIEELIPNNKLRCHATAIAIRTFLVISSLVVALSVPYFGALMALIGAFMSMTVALIYPCACYLKIHNGRLSKLEITKCVLVIIVGVLSSIVGTYSALLRIANGDD 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01985 552 MobiDBLite consensus disorder prediction 1 64 - -
Aip04g01985 552 PANTHER AMINO ACID TRANSPORTER AVT1D 46 547 - -
Aip04g01985 552 MobiDBLite consensus disorder prediction 49 64 - -
Aip04g01985 552 Pfam Transmembrane amino acid transporter protein 162 543 IPR013057 -
Aip04g01985 552 PANTHER OS05G0424000 PROTEIN-RELATED 46 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01985 Aip-Chr4 92077961 92090121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01985 10 549 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.439 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01985 K15015 - pop:7468814 618.231