Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01982 ATGGGTGAGATGTACTTTCTCCCAATGGATGTGGACATCGTCAATAAGAAGAATTTAGAAGAGTTGTTCAGAGGACTTGGATATTTGGGAAACCCTGTCACCATCGAAGAAACCCTTCAAACCTCACCATCGCGAAGAAACCCTCTCACTCACCACTCATCGTCGCTCCTCCTCACCCTCCTCCTCGTCGCTGCGCCGCCCTCACCATCGTCATCTCTGCGCTTCTCATCGTCCTTCCCCTTTCAATTCGATCGAGTAACCCTCATCTCTGCGCTATATAATGAGCTTAATGAATATTTTTTCTTTTATTCATCACCAATTCATGCTACCTGCACAAACTCGCGCCTTCTCCTTCGATTCGTCGCCGCTGCTCATCTCTTCTTCAAGGGTTTTCACCTTCGATTCGTCGTCGTTCATCTCTTCTTCACCGTTGCGATTCATCACCGCGCTCACCAAGTAAGCATTCTGTGCCTCATTCTTTTCTTCTCGCTCATTCTCTTACTCGCTCTCTCTCACTTGCCCTCTCTGTGCAGTGTCAAAGAAACTGTGTCCTCTCTAGCGACCTCTTCTCTGCTCTACTATGAAGCATCAAGGTTTCCAATGAGGCAAAGCATCGATCCCTTACAAGCAAGTCGTGCAATTGAGTTGAAGAATCATTCTTTACTATATGGAAAAGTGATAAGGGTCATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGGGAATGTTTTTGTTAAGAACTTAGCTGAATCCATAGATAATGCGGGATTACATGATTTATTTCAAAAGTTTGGAAATATCTTGTCTAGCTTTGGGAATTGCTTTGGTGCTTCAAATTGGTTTAGAGGGAGTGATGATAGTGATACTGCTGAGAAGCCACGGGAACGAGGTAATAGAATTGAGGTTGTGACTAATTGA 927 0.4488 MGEMYFLPMDVDIVNKKNLEELFRGLGYLGNPVTIEETLQTSPSRRNPLTHHSSSLLLTLLLVAAPPSPSSSLRFSSSFPFQFDRVTLISALYNELNEYFFFYSSPIHATCTNSRLLLRFVAAAHLFFKGFHLRFVVVHLFFTVAIHHRAHQVSILCLILFFSLILLLALSHLPSLCSVKETVSSLATSSLLYYEASRFPMRQSIDPLQASRAIELKNHSLLYGKVIRVMWSRRDPDVRKSGRGNVFVKNLAESIDNAGLHDLFQKFGNILSSFGNCFGASNWFRGSDDSDTAEKPRERGNRIEVVTN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01982 308 Gene3D - 233 295 IPR012677 -
Aip04g01982 308 SUPERFAMILY RNA-binding domain, RBD 206 276 IPR035979 GO:0003676
Aip04g01982 308 PANTHER RNA BINDING PROTEIN 169 273 - -
Aip04g01982 308 PANTHER POLYADENYLATE-BINDING PROTEIN 169 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01982 Aip-Chr4 91780975 91789597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01982 165 272 Eukaryotic Initiation Factors Gene Family AT2G36660 52.778 1.07e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01982 K13126 - aip:110271131 206.453