Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01967 ATGCAGAGTTCCTATTTCAGAGATGGAAGCAAGATATTGATGATGAGGATGATCCATATTCAAGTGGGAGGCCGTCATGGTTTAGAAAGCAATATACCGCTGGAGCCTCTGGAAAGCACAGGAATAACGGTCAAGGAAGTCATCGATACAGAAATGGGATATAAAGCATATTATGGAGTCATTACTAAAGCATATTGTGGAGTCATTACTTGCAAAATCCTCAAGCAAGTAAAATACTTTATGTCTTCAACTTGGGAGGATTGCAAGCCACTTGTTGAGGAGACACAAGAGTACAGATCAATGGGGGATGAAAACTACATTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGACTGGCTCAAAATTGTGAGGCTGCTAGGAAGAGTCGATTGAGGAAGAAGATCATCTTGGCTAGAGAGTATCTAAATGATGTTTCCATTAGCAGAGAACAATTGAAGTACCTGGTTTTTGAAGCTTTCCGAGGTGGTTGTCAGAATAAATGCAATGTGGGATACACATTTATCAACATGCTGTCGGCATCACACATTATTCCATTCTATGAGACATTTAATGGGAAGAAGTGGGAGAAGTTTAATAGTGAAAAAGTTGCTTCTCTGGCATATGCACGAGTCCAAGGAAAGGCTGCACTGTCGCCGTCCATCATTCTACTCCTTGGACCTCATTTCCATCCGATCCACCTCAGATCCGCATCGCTGTCATCATTTGTTCATCTCAGATTTACGTCGCCAAGGTCTTCTAGCCACCGTTATTGTTCTTGTTACAACACCACACCTCTGCCGCTTGTACCGCCGCCGTTCTTGCACGTAGACGCACAAGATCGCTGCTGTCGCCAAATATTATCTAATGGAAAGGCCTTTGAATGCCTCACGAGTGGTTCGATTCTTATAAATGGAAGGAATGAATCAATCCTCTCCTTCAAGAAAATTATTGGCTTTGTGACACAAGATGGTGTAGTTCATGGAAACTTGATAGTGGAAGAGAATCTCTGGATTAGTGCACAATACAGGTTATCAGCTGACTTGTCAAAACAAGAAAAAGTTCTAGTTCTTGAAAGAGTTATTGAATTCTTGGGGCTTCATTCTGTGAGGAATTCCTTGGTTGGAACGGTGGAAAATCGAGGGATCTTTGGCGGCCAAAGGAAGCGTGTAAATGTCGGATTAGAAATGGTTATGAAACGTTCACTTCTGATCTTGGATGAACCCACTTCTAGTTTGGACATTGCATCATCTCAGCTTCTTTTAAGAGCTTTAGGATGCGAAGCGCTTGatgtaaaacccggttaa 1329 0.4161 MQSSYFRDGSKILMMRMIHIQVGGRHGLESNIPLEPLESTGITVKEVIDTEMGYKAYYGVITKAYCGVITCKILKQVKYFMSSTWEDCKPLVEETQEYRSMGDENYIVDSNDQTKLKHEDQKTLRRLAQNCEAARKSRLRKKIILAREYLNDVSISREQLKYLVFEAFRGGCQNKCNVGYTFINMLSASHIIPFYETFNGKKWEKFNSEKVASLAYARVQGKAALSPSIILLLGPHFHPIHLRSASLSSFVHLRFTSPRSSSHRYCSCYNTTPLPLVPPPFLHVDAQDRCCRQILSNGKAFECLTSGSILINGRNESILSFKKIIGFVTQDGVVHGNLIVEENLWISAQYRLSADLSKQEKVLVLERVIEFLGLHSVRNSLVGTVENRGIFGGQRKRVNVGLEMVMKRSLLILDEPTSSLDIASSQLLLRALGCEALDVKPG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01967 442 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 298 437 - -
Aip04g01967 442 Pfam ABC transporter 305 418 IPR003439 GO:0005524
Aip04g01967 442 Pfam RNA recognition motif 2 169 226 IPR007201 -
Aip04g01967 442 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 298 437 - -
Aip04g01967 442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 432 IPR027417 -
Aip04g01967 442 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 140 IPR004827 GO:0003700|GO:0006355
Aip04g01967 442 Gene3D - 295 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01967 Aip-Chr4 90320586 90331966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01967 101 173 bZIP Transcription Factor Family AT5G06950 48.718 1.28e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01967 - - aip:107636739 288.885