Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01964 ATGCCAAATCATGGAAAACAAGCTTGTGTAATTCCTGGTTTGCCGGATTTTACTGAAGTTTATAGCTTTATTGGAAGCATTTTTTATCCTGACACTAGAGGCCATGTTCATAAGCTGCAGGAAATGGATCCTATAAATTTTGAAACTGCTGCTTGTCATAATTGGTCAAATGAGAAGTGCCTAACAGTGCTGAAAAACTGTTATAAAGCACTTGAAGAGAATGGAAAAGTGATTATCTTTGAGATGATCATGCCTGAAGAACCAGATTTAAGCAATTCCTCTAAGCTTGTCTCTATTGTTGACAATTCTATGTTCCTTCATGCTGGAGGCAAGGATAGAACAGAGAAAGAATTTGGGAAGCTAATCAAAGACGATTTCTTTTTCGGTTTGATTTAG 396 0.3662 MPNHGKQACVIPGLPDFTEVYSFIGSIFYPDTRGHVHKLQEMDPINFETAACHNWSNEKCLTVLKNCYKALEENGKVIIFEMIMPEEPDLSNSSKLVSIVDNSMFLHAGGKDRTEKEFGKLIKDDFFFGLI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01964 131 Pfam O-methyltransferase domain 51 125 IPR001077 GO:0008171
Aip04g01964 131 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 50 124 IPR029063 -
Aip04g01964 131 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 131 IPR016461 GO:0008168
Aip04g01964 131 Gene3D Vaccinia Virus protein VP39 50 123 IPR029063 -
Aip04g01964 131 PANTHER O-METHYLTRANSFERASE 50 124 IPR016461 GO:0008168
Aip04g01964 131 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 50 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01964 Aip-Chr4 90140099 90141600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01964 52 130 Monolignol Biosynthesis Gene Families AT5G54160 55.000 2.40e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01964 - - aip:107636741 276.944