Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01956 ATGCACAGTATAGCCATGTCTCTAAAGCTTCTTGCAGTGCTGTTTTTGCAGGTGGAAATGGCAGTAGTAGCAAATGAAGATTATAACACCAACTTCATCTATAACAATGGCTTCCAGTCTTCAAACTTGACCCTGGATGGCATCGCGGGGATAACAACCAACGGTCTTTTAAAACTTACAAACGACACAAAACAAGAGAAAGGTCACGCGTTCTATCCATATTCCGTTACTTTTAAGAACACCACTTCCGGTTTCAATAACGAAGAAGTTTTTTCTTTCTCAACTACTTTTGTTTTTGCAATACGGTCTCAATACTCAGCTCTGAGTGGCCATGGGATTGTTTTCGTGATTGCGCCGCAGAGAGGGCTTCCGAATTCTCTACCAAGCCAGTACCTCGGCCTCTTCAACAAAACGAACAATGGAAACGCAACCAATCATGTGTTTGGTGTGGAACTTGACACCATTCTCAGCACAGAGTTCTTTGATATCAACGATAACCATGTTGGAATCGATATAAATGATTTGAAATCAGCACAGTCACAACCTGCAGGGTATTATAGTAATTCCGGTTTCAAGAATTTGAGCCTTATCAGTGGCTACCCTATGCAAGTTTGGGTGGAATACGATGGTGTGAAGAAGCAAATTGATGTTACTTTAGCACCAACCAACGTTGAAAAGCCGCAAAAGCCCTTATTATCATTGACCAAAGATCTTTCACCGATTCTAAACAATACCATGTATGTTGGATTCTCTTCCTCAACCGGTTCAGTTTTAACTTCCCATTATGTTCTTGGTTGGAGCTTTAAGATCAATGGCCAAGCTCAACCGCTTCTTATTTCTCAACTCCCAAAGCTTCCAAGGCTAGGTGAAAGAAAGGAATCAAAGGCTCTCACTATTGGGGTACCTATGATTTCACTCACTGTGGTGTTCGTGGTGATTCTAGCGGTGATTTATTTCATAAGAAGAAAGAAGAAGTTTTCAGAGTTGGTTGAAGATTGGGAAATGGAATACGGTCCTCACAGGTTTAAGTACAAAGATCTTTACTTTGCAACAAAGGGGTTCAAGGAGAAGGAGCTTTTGGGAAGTGGTGGATTTGGAAGGGTCTACAAAGGTGTGATGCCAGCTTCTAAGGTTGAGGTTGCTGTGAAGAGGGTGTCCCATGAATCTAGGCAGGGGATGAGGGAATTTGTGGCAGAGATTGTTAGTATCGGCCGCCTCCGCCACCGTAATCTGGTTCCTCTCCTCGGATACTGCCGTCGTAAAGGGGAGTTGCTTCTTGTCTATGACTACATGCCCAAGGGAAGCTTAGACAAGTATCTGTATAACCAACCAAGAGTCACCCTCAATTGGAACCAAAGGTTCATAATCATCAAAGGAGTTGCTTCAGGTCTGTTCTATCTACACGAAGAATGGGAGCAAGTAGTGGTCCATAGAGACATAAAAGCGAGCAATGTATTACTAGATGCAGAATTGAATGGCAGGTTAGGTGACTTTGGTCTTGCAAGGTTGTATGACCATGGAAGTGATCCTCAAACCACACATGTTGTCGGAACACTTGGATACCTTGCACCTGAGAACACTAGAACCGGTAAGGCCACTACAATGTCCGACGTATATGCTTTCGGCGCATTTCTTCTTGAAGTTGCCTGTGGAAGGAGGCCAATAGAGCTAGTAGATGAATCCGAGAACTCAATACTGGTTGATTGGGTTTATAGTTGTTGGAAAAATGGTGAGATTCTTGAGGCAAAGGATCCAAATTTCGGCACAGATTATAGAGCAGAAGAGGTTGAACTTGTGTTGAAACTTGGTTTGTTATGTTCACATTCTGAGCCTATGGCTAGGCCAAGCATGCGGCAAGTTGTTCAGTACTTAGAAGGGGATTTTCCTCTTCCTGATTTACATTTGCTTAGTTTGTCTTCAACAGGATTAACATTTGGGCACTATGTAGAGGATTTTCAAGAGTTTCAATTGTCTTATCCCTCCTCTTCTACTAGTAAGGCATTTTCCCGTGATACTACTACAACTACTACTTCAGTTGCTGCTTCACTTCTCTCTGGTGGTCGTTGA 2067 0.4277 MHSIAMSLKLLAVLFLQVEMAVVANEDYNTNFIYNNGFQSSNLTLDGIAGITTNGLLKLTNDTKQEKGHAFYPYSVTFKNTTSGFNNEEVFSFSTTFVFAIRSQYSALSGHGIVFVIAPQRGLPNSLPSQYLGLFNKTNNGNATNHVFGVELDTILSTEFFDINDNHVGIDINDLKSAQSQPAGYYSNSGFKNLSLISGYPMQVWVEYDGVKKQIDVTLAPTNVEKPQKPLLSLTKDLSPILNNTMYVGFSSSTGSVLTSHYVLGWSFKINGQAQPLLISQLPKLPRLGERKESKALTIGVPMISLTVVFVVILAVIYFIRRKKKFSELVEDWEMEYGPHRFKYKDLYFATKGFKEKELLGSGGFGRVYKGVMPASKVEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPKGSLDKYLYNQPRVTLNWNQRFIIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPENTRTGKATTMSDVYAFGAFLLEVACGRRPIELVDESENSILVDWVYSCWKNGEILEAKDPNFGTDYRAEEVELVLKLGLLCSHSEPMARPSMRQVVQYLEGDFPLPDLHLLSLSSTGLTFGHYVEDFQEFQLSYPSSSTSKAFSRDTTTTTTSVAASLLSGGR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01956 688 Gene3D Transferase(Phosphotransferase) domain 1 431 634 - -
Aip04g01956 688 Gene3D Phosphorylase Kinase; domain 1 339 430 - -
Aip04g01956 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Aip04g01956 688 Pfam Legume lectin domain 30 282 IPR001220 GO:0030246
Aip04g01956 688 PANTHER - 13 662 - -
Aip04g01956 688 CDD lectin_legume_LecRK_Arcelin_ConA 30 272 IPR001220 GO:0030246
Aip04g01956 688 Pfam Protein kinase domain 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01956 688 CDD STKc_IRAK 360 626 - -
Aip04g01956 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 289 IPR013320 -
Aip04g01956 688 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Aip04g01956 688 Gene3D - 28 279 - -
Aip04g01956 688 ProSiteProfiles Protein kinase domain profile. 354 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01956 688 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01956 688 SUPERFAMILY Protein kinase-like (PK-like) 335 641 IPR011009 -
Aip04g01956 688 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 13 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01956 Aip-Chr4 89879428 89882445 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01956 31 688 Receptor kinase-like Gene Family AT2G37710 66.415 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip04g01956 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01956 - - adu:107484540 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01956 04 89879428 89882445 Aip04g01956 04 89879428 89882445 ECH