Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01955 atggcatcgaatgCCCCAGAATATGGATATGCCTTGAAGGTGGATGAGAAGATTGATGTTTATAGCTATGGAGTAGTTCTGCTGGAGCTGCTGACGGGTAAGCGGCCCACAGATGAGGAGTTCGGAGAAAGTGTAGACATTGTAGAGTGGATTAGAAGAAAATTGAGAGACAACAAGAATCTAGAAGCAGCGTTAGACCCAAACGTAGTAGGAAACAGTAGGCATGTGTTAGAGGAGATGCTGTTAGTTCTAAGAATAGCACTTCTTTGCACTGCAAAGCTTCCAAGGGAGAGACCAACCATGAGGGATGTGATAATGATGCTTGAAGAAGCAAAACCAAGGAGAAAGAGTAGCAGCAACAACAACAACAACAATGAAACAACTTGTTCAATTAACAGCAGCAATAAAGAGGTTCCAGTTTTTAGTCCATCACCAGTTATTGGCCTTGTGTAG 453 0.415 MASNAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPTDEEFGESVDIVEWIRRKLRDNKNLEAALDPNVVGNSRHVLEEMLLVLRIALLCTAKLPRERPTMRDVIMMLEEAKPRRKSSSNNNNNNETTCSINSSNKEVPVFSPSPVIGLV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01955 150 MobiDBLite consensus disorder prediction 117 136 - -
Aip04g01955 150 MobiDBLite consensus disorder prediction 111 136 - -
Aip04g01955 150 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 5 126 - -
Aip04g01955 150 SUPERFAMILY Protein kinase-like (PK-like) 5 112 IPR011009 -
Aip04g01955 150 Gene3D Transferase(Phosphotransferase) domain 1 2 138 - -
Aip04g01955 150 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip04g01955 150 Pfam Protein tyrosine and serine/threonine kinase 5 107 IPR001245 GO:0004672|GO:0006468
Aip04g01955 150 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01955 Aip-Chr4 89857783 89859171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01955 5 150 Receptor kinase-like Gene Family AT1G08590 57.534 3.20e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip04g01955 PK_Tyr_Ser-Thr 4.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01955 - - jre:108995985 207.994