Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01952 ATGTCTTCTTTTATTTCTCCAACATCTCCGGGATATGTAACTGAAGCTTCGAGAGAAAACGATGTAGTAATAATCAACAGTTCAGCTCTCGTTGAAACAATGATGAATTGGTATGAATATGAACGATGGTCGGAGATGTTTCCTTCTATGATTTCTAGAGCTGTAACACTTGATGTTATAGCTAGTGGCATAGGAGGGTCAAATAATAATGCTTTTCAGATGCAAGCGGAAATTCAATTGCTTTCGCCACTCATTCCTGTTTGTCAATTGAGCTTCCTCAGGTTTTGCAAGCAGCATGCAGAAGGGTTGTGGGTAGTAGTAGATGCTTCAGTTGATGCTGGTCGCAATTTTAAGAGGCTTCCATCAGACTTTCTTGTGCAAGATACACCAAACGATTCTAATCCAACCGGAAGTGGATGTGATTCAGAAGAAGCTACTGTTGAGGAATCTAATGGGAATAAGGATGCTATGGACTTTGAGATTCGTTCAAGAGAGAATATGGTGGGGAAACTAgaAATCAGAGGCGGAATTGTTGCGGTAGCGGTTGAGCCAGCAAGAACAGTAGCTTCAACATCCACTGGCGTTTACAGCAGCAGCACCAGCGGTGACATGGACGTCATCTACCACTACAACTCACGACAACAACTCCAATGGTGGTTTCCGTGTTTCCAGCAATGGCGACAGTATGTGACAACGAGGGCGACAACAGTTCATCAGCAGGAGGAACGACCTCCTTCTTCCCCACCTCACCGTGTCTATTCCTGTTCTCTCAGTCTTGTTCGCTCTCTCTCACCTTTTGCACATACAACAATGACGGCGACTGTGGTAGCAGCGGCGGTGTTGGAGCCTTCGGTGGTGGCGAAGGAGTCAAGGTGTGGCGACGGTGACATAGTCGGCTTCTGTGGGTCaaaatcagcacctgtgcgtacgcataggctatactcgcaatga 951 0.4406 MSSFISPTSPGYVTEASRENDVVIINSSALVETMMNWYEYERWSEMFPSMISRAVTLDVIASGIGGSNNNAFQMQAEIQLLSPLIPVCQLSFLRFCKQHAEGLWVVVDASVDAGRNFKRLPSDFLVQDTPNDSNPTGSGCDSEEATVEESNGNKDAMDFEIRSRENMVGKLEIRGGIVAVAVEPARTVASTSTGVYSSSTSGDMDVIYHYNSRQQLQWWFPCFQQWRQYVTTRATTVHQQEERPPSSPPHRVYSCSLSLVRSLSPFAHTTMTATVVAAAVLEPSVVAKESRCGDGDIVGFCGSKSAPVRTHRLYSQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01952 316 MobiDBLite consensus disorder prediction 124 155 - -
Aip04g01952 316 Pfam START domain 12 131 IPR002913 GO:0008289
Aip04g01952 316 SUPERFAMILY Bet v1-like 22 134 - -
Aip04g01952 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 132 IPR042160 -
Aip04g01952 316 MobiDBLite consensus disorder prediction 126 146 - -
Aip04g01952 316 ProSiteProfiles START domain profile. 1 112 IPR002913 GO:0008289
Aip04g01952 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 5 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01952 Aip-Chr4 89510976 89517310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01952 2 131 Homeobox Transcription Factor Family AT3G61150 57.037 6.28e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01952 K09338 - gmx:100785102 153.295