Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01951 ATGATTCTTAAACAGGAAAATGAGAAGCTCCGAGCTGAGAACAGTGTGATGAGGGAAGCTATGGCAAACCCAATGTGCAACAACTGTGGTGGAGCAGCCATTCCAAGGCGAATTTCATTTGATGAGCATCAAATTAGAATTGAAAATGCTCGATTGAGGGATGAATTGAATCGTATATGTGCCTTGGCGAACAAGTTTCTCGGCAGGCCAATCTCATCATTGGCCAGCCCCATGTCCTTGCTTGCCTCGAATTCTGGTCTAGAGCTCGGTATTGGCAGGAATGGTTTTAGTGGTGGTTCAAGCAGTCTTGGCATGTCAATGGGGCTTGATTTTGGGGACTTTTCAGGGGGCACTATGCCTGCGATTTTCGGGATTAGATCACCTATGGGGTTGATGGGAAATGAAATCCATGCGGAGATATCTATGTATTGGAACTTGCATTAG 444 0.4572 MILKQENEKLRAENSVMREAMANPMCNNCGGAAIPRRISFDEHQIRIENARLRDELNRICALANKFLGRPISSLASPMSLLASNSGLELGIGRNGFSGGSSSLGMSMGLDFGDFSGGTMPAIFGIRSPMGLMGNEIHAEISMYWNLH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01951 147 Coils Coil 3 23 - -
Aip04g01951 147 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 146 - -
Aip04g01951 147 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 146 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01951 Aip-Chr4 89510431 89510874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01951 1 113 Homeobox Transcription Factor Family AT5G52170 50.862 2.28e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01951 K09338 - gmx:100785102 177.948