Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01946 ATGGAAGCCACTTCTATGACTCATCAGTTGTTGAAGGGCTTTTGTGATGGTACACAGTGGAAGTATGCTGTTTTTTGGAAGCTTAACCACCATTTCCCCATGACTTTGACCTGGGAAGATGGATATTATGGTTACCAGAAAACTAATGAGGCCGCGGAGAGTATGTTGGATGACATCAATTTCAAATTCCCAGCTGAGGTATATTCTTCAAGTGGTGAAAGTATTGATGATCCAGGAGATTATTCTGCTGGACTACTCGTGGCTGAAATGTCTCATCATAAATACAGTTTGGGAGAGGGGGTTGTTGGTAAGGTAGCTTTTACTGGGAATCATTGTTGGGTGAGTGAGGATATTCTTACCCATGGGTTGGATGCTAATTTAATGCCTGAGTGTCCTGATGAATGGCTTCTTCAATTTGCCTCTGGCATCAAGACCATTGTGCTGATTCCAGTTCTTCCTCAAGGAGTTTTGCAATTTGGTTCATTTCAAGCGGTTGCTGAAGACCTGGAATTTGTTACCAATATCAAGGAGAAATTCCATTCCATTCATCTTCTGGCAGCAAATACTACAGCATTGAACTATGGAGTTGATTGTCAAGATTGGTCATTCTCAGACCCAACAAATACTTTTATGGATATCTTGGATGAATCATCCAATATCACAAACAGTACAATAAAAACTGATGTTCTGGCTAGAATTGTGCCTAGTGTGAATGCATCAACAATGTTGAACCCAGCAATGTTGTCTCAGGTGGAGACAAAAGATAATCTGGAAGAAGAGATATGGCCCACTTCTCCGTGGGTCAATGATGTGGGAGTATTCCAAGAGATATCAAATGGATTAGGTTTATACTCCGGTAAGACAGAGCAACAATTTGGAAGCAATGCAACTGGTTATGAGGATATCAAGGATCTGAATGGCTTCTTGGCTTTTCCCTCGGAGTCTGAATTGCACAAAGTGCTTGGATCAGCAGCTCCACACAGGAAAACAAGGAATTCCATGTCTAAACATACCTCTGTTGTGGATACTTACAGTAACTCAACCTTTATATCCAACAACAAAGAACATGGTGATATTGAGAGTTTGGAGCACCCTGAAGATGTTGATCCGAAATATCTTTTGGATGCTGTTTATGGGGATTTATTTAGTGCCTGCAACGATACTTCAAGCATATCCAACAGTTTTAGGTCCCCTATAAGCAAGAAGATGCCATTTACCGGTTTGATTCATCCCAGGAACAGTTGCGAAGAAAGCAGTTTGGTTATGAAAGATGTGAAAGGTGATCTTAAGGCGGCAGTTAGAGTCAAGGGCAGAGATGCTATTACATCGCCATCTTTTGATGGAAATTCAAGCTTATTGACTGACGAGCCTCAAGAAGAAAAGGTTTATAGTCATTTGCAATCTACTAATGGACCAAAGATCTCTAGTACCTACAAGAAAAGAGCAAGGCCAGGTACCCAAAAGTCAAGGCCGAGAGATAGACAATTGATCATGGACAGGATGAAGGAGTTGAGGGAGCTTGTCCCAGATGGTGGAAAGTGTAGCATCGACAACCTCTTGGAGAGAACCATAAAGCATATGCTATACTTGAGAAAAATAACAAGCCAAGCTGAGAAGCTTAAGAGATTCGCACATAAAGAGGTTCCCAAATGCAGCAAGCAGAAGATCAATTATAACCAATCAGGGAGGAGCTGTGCATATGACTTGGAAAGTGAACAAGCATGGCCCATAGTGATAGAAGATCTGGAATGCTCAGGCCACATGCTTATTGAGATGGTATGCAATGAGCATGGATTCTTCTTGGAGATTGCTCAGGTGATCCGGAAGCTGGAACTGACCATCTTGAAAGGTGTCTTAGAAAACCGCTCATCCGCAGCCTGGGCTTGTTTCATTGTTGAGGCTCCAAGAGGGTTTCACAGGATGGATGTTTTATGTCCTTTATTGCATCTTCTACAGCGGAGGAAGAACCCTGTTCCATATAAAAGCTGA 1989 0.4203 MEATSMTHQLLKGFCDGTQWKYAVFWKLNHHFPMTLTWEDGYYGYQKTNEAAESMLDDINFKFPAEVYSSSGESIDDPGDYSAGLLVAEMSHHKYSLGEGVVGKVAFTGNHCWVSEDILTHGLDANLMPECPDEWLLQFASGIKTIVLIPVLPQGVLQFGSFQAVAEDLEFVTNIKEKFHSIHLLAANTTALNYGVDCQDWSFSDPTNTFMDILDESSNITNSTIKTDVLARIVPSVNASTMLNPAMLSQVETKDNLEEEIWPTSPWVNDVGVFQEISNGLGLYSGKTEQQFGSNATGYEDIKDLNGFLAFPSESELHKVLGSAAPHRKTRNSMSKHTSVVDTYSNSTFISNNKEHGDIESLEHPEDVDPKYLLDAVYGDLFSACNDTSSISNSFRSPISKKMPFTGLIHPRNSCEESSLVMKDVKGDLKAAVRVKGRDAITSPSFDGNSSLLTDEPQEEKVYSHLQSTNGPKISSTYKKRARPGTQKSRPRDRQLIMDRMKELRELVPDGGKCSIDNLLERTIKHMLYLRKITSQAEKLKRFAHKEVPKCSKQKINYNQSGRSCAYDLESEQAWPIVIEDLECSGHMLIEMVCNEHGFFLEIAQVIRKLELTILKGVLENRSSAAWACFIVEAPRGFHRMDVLCPLLHLLQRRKNPVPYKS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01946 662 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 481 530 IPR011598 GO:0046983
Aip04g01946 662 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 6 658 IPR043561 GO:0003700|GO:0006355
Aip04g01946 662 MobiDBLite consensus disorder prediction 465 482 - -
Aip04g01946 662 MobiDBLite consensus disorder prediction 465 493 - -
Aip04g01946 662 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 179 IPR025610 -
Aip04g01946 662 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 6 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01946 Aip-Chr4 89022706 89029021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01946 474 656 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 44.118 4.70e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01946 - - adu:107484428 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01946 04 89022706 89029021 Aip04g01946 04 89022706 89029021 ECH