Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01943 ATGAATAGCTGCGCGAGGAGAAGAGAGGAGAATGGGGATGTCGCCGACGGAAAAGGGGACTGCTGCCGCCGTAACATGCCTCGCCGTTGCCGTCGATTTCGCCGGGAGAAGATGCGTGGAGAGAAGAGCCACGGGTCAGGCCAGAGATCGCCGAGGGGGAGAGAGCTGCTGTCGCATCTGCTGCAGGTTCGCCATTGTTGCCATCATGGAGCTGTGAGGAGGCCGTCACTGGTGCGAGCTCACGGAGGGAGAGAGGGAGCCCGCGAAGTCGCTGCTGAGCCGCCGTTGATGCGAGGAACAGAACACGCGAGAGGGGTTCGAGGTTGCGCTACACTTATAACTGACAATCTCATTGTGGGATCCCAACCACAGAAATCTGAAGACATCAATCACCTCAAGAAGGAAGGTGTGACATACATTCTGAATTTGCCGCAAGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAAAAATGAGGTGTCACGAACTCGATGTTCGACATATGAGGAGGCCAGTAAGTAAGAAAGCTGCAAGCCTGCATTTCAGTCAATTTTGTTGA 567 0.5326 MNSCARRREENGDVADGKGDCCRRNMPRRCRRFRREKMRGEKSHGSGQRSPRGRELLSHLLQVRHCCHHGAVRRPSLVRAHGGREGAREVAAEPPLMRGTEHARGVRGCATLITDNLIVGSQPQKSEDINHLKKEGVTYILNLPQDKDVEYWGIDLKSIKMRCHELDVRHMRRPVSKKAASLHFSQFC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01943 188 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 111 176 - -
Aip04g01943 188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 104 174 IPR029021 -
Aip04g01943 188 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 111 176 - -
Aip04g01943 188 MobiDBLite consensus disorder prediction 33 53 - -
Aip04g01943 188 Gene3D Protein tyrosine phosphatase superfamily 101 188 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01943 Aip-Chr4 88645464 88646467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01943 111 175 Protein tyrosine phosphatase (PTP) family AT3G10940 74.242 5.50e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01943 - - adu:107488438 117.857