Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01938 ATGACTAAAAGATACCGGGAATGTGCCGTGGGAATCGACCTTTGTACGACATACTCATGTGTTACTGTATGGCTGGATGAGTATCAACGAGTGGAGATTGTCCACAATGACCAAGGCAATAGAACAATACCATCATGTGTTGCATTTACTAACAAGCAAAGGTTGATTAGTGATGCTGCTAAGAACCAAGCTACGTCCAATCCAGATTCTAAAAGGTTGATTGGTAGGAAATATAGTGACTCCATTATCAAGAATGACATGATGATGTGGCCATTTAAAGTCATTCTTGGTGTTGATGACAACCAATGA 309 0.4013 MTKRYRECAVGIDLCTTYSCVTVWLDEYQRVEIVHNDQGNRTIPSCVAFTNKQRLISDAAKNQATSNPDSKRLIGRKYSDSIIKNDMMMWPFKVILGVDDNQ 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01938 102 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 101 - -
Aip04g01938 102 PANTHER HEAT SHOCK PROTEIN 70KDA 5 101 IPR013126 GO:0005524|GO:0140662
Aip04g01938 102 Gene3D - 2 102 - -
Aip04g01938 102 SUPERFAMILY Actin-like ATPase domain 9 96 IPR043129 -
Aip04g01938 102 Pfam Hsp70 protein 9 99 IPR013126 GO:0005524|GO:0140662
Aip04g01938 102 PRINTS 70kDa heat shock protein signature 60 68 - -
Aip04g01938 102 PRINTS 70kDa heat shock protein signature 8 21 - -
Aip04g01938 102 PRINTS 70kDa heat shock protein signature 38 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01938 Aip-Chr4 87707538 87707956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01938 1 100 Calmodulin-binding Proteins AT1G56410 57.143 6.56e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01938 K03283 - gmx:102667578 150.984