Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01924 ATGACCCTCAATAACGACGCCACCAACAGTGGCTGCAAGGTGCGACAGTCAATGCGCCGGTGCTGCCCCCTTCTTCTTTGCCACCACCAATCACGCGAAGTGCAAGTTATGTTTTTTCTATTGCATGTTTTAAGAGATGGCCATTGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAACATTAAATTAGGAGATATCATTCCGGCTGATGCTTGTCTTCTCGAGGGCAATCCTCTAAGTGTTGATCAGTCTGCTTTAATAAGAGAATCTCTTCTAGTGACCAAGAATCCAACTGATGAAATATTTTCTGGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTACATGCCTTCTTTGGTAAAGCGGCTCACTTGGTGGACAGCGCTAACCAAGTTGGACACTTCCAGAAAGTGCTTACAGTAATTGGTAACTTCTGCATTTGCTCAATTGCTCGAAACGTATGA 495 0.4404 MTLNNDATNSGCKVRQSMRRCCPLLLCHHQSREVQVMFFLLHVLRDGHWSEQDAAILVPGDIINIKLGDIIPADACLLEGNPLSVDQSALIRESLLVTKNPTDEIFSGSTVKKGEIEAVVIATGVHAFFGKAAHLVDSANQVGHFQKVLTVIGNFCICSIARNV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01924 164 Gene3D - 124 161 - -
Aip04g01924 164 PANTHER PLASMA MEMBRANE ATPASE 42 162 - -
Aip04g01924 164 SUPERFAMILY Calcium ATPase, transduction domain A 41 136 IPR008250 -
Aip04g01924 164 PANTHER CALCIUM-TRANSPORTING ATPASE 42 162 - -
Aip04g01924 164 Gene3D - 42 123 - -
Aip04g01924 164 Pfam E1-E2 ATPase 42 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01924 Aip-Chr4 87030727 87032624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01924 43 161 Primary Pumps ATPases AT4G30190 84.034 6.91e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01924 K01535 - gmx:100791692 207.994