Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01923 ATGGCTGGGATGGATCTCCTCTACAGTGACAAAACTGTAACCTTAACCTTGAATAAGCTCAGTGTTGATAGAATCTTGATTGAGGTTGCTATAGGTGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGGGGGTCCATTTTCTTCCATTCAATCCTGTAGACAAGAGGATTGCTCTAACTTACATTGATTCTGATGGAAATTGGCCCCGTGTGAGAAAAGGGGCTCCGGAGAAGATCATAACCCTTTGCAACTGCAAAGAGGATGTCAGGAAGAAGGTTCATGAAGTGATTAATAAGTTTGCTGAGCATGGACTTCGGTATTTAGGTGTTGCAAGATGCATATTGTAA 351 0.4274 MAGMDLLYSDKTVTLTLNKLSVDRILIEVAIGAAIVGMLADPKEGVHFLPFNPVDKRIALTYIDSDGNWPRVRKGAPEKIITLCNCKEDVRKKVHEVINKFAEHGLRYLGVARCIL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01923 116 PANTHER PLASMA MEMBRANE ATPASE 30 113 - -
Aip04g01923 116 PANTHER CALCIUM-TRANSPORTING ATPASE 1 29 - -
Aip04g01923 116 PANTHER PLASMA MEMBRANE ATPASE 1 29 - -
Aip04g01923 116 Gene3D - 10 116 IPR023299 GO:0000166
Aip04g01923 116 PANTHER CALCIUM-TRANSPORTING ATPASE 30 113 - -
Aip04g01923 116 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 15 114 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01923 Aip-Chr4 87030105 87030712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01923 1 113 Primary Pumps ATPases AT2G24520 61.538 1.94e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01923 K01535 - gmx:100791692 171.785