Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01907 ATGAACTGCGGCGTAGGAAAATTCATTCTTGTAGGTTCGTTCACCACAAACCCTAGAATACCTCTAGATTTTTTGCAAGGTGACAAATTTAGAGCAGCAGCAGATAATTACATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTTTTCTCTGATCTTTCGTCTTTGTATAATCACCCTGGGAAGGAAGTGGCGGCAAGAGTAGTAATGATAATGAGGGTGGAAAATTCATTTGACATGAATGAAGGAACGACTATGAGTGATGATGAGAAATTGGAAGAAGAGAATAATAATGAAGCAAAGGAGGAGGAGGAGGATAACAATGAAGAAGGGAATTCAACAAACCCAAGTAGCAACAGCACAGCATCAAGAGAAGGGAAGAGAGGGAATGGTGTGAGACAATATGTGAGATCAAAGATGCCAAGGCTTCGTTGGACTCCTAATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGAAGGTCAAGAAAGTAATTCCACTCTCAAACATTTGTAA 519 0.4104 MNCGVGKFILVGSFTTNPRIPLDFLQGDKFRAAADNYIRPLLTKGVPSLFSDLSSLYNHPGKEVAARVVMIMRVENSFDMNEGTTMSDDEKLEEENNNEAKEEEEDNNEEGNSTNPSSNSTASREGKRGNGVRQYVRSKMPRLRWTPNLHLSFVHAVQRLEGQESNSTLKHL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01907 172 MobiDBLite consensus disorder prediction 79 134 - -
Aip04g01907 172 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 84 164 IPR044848 GO:0003700
Aip04g01907 172 Coils Coil 89 112 - -
Aip04g01907 172 Pfam N-terminal acetyltransferase A, auxiliary subunit 17 95 IPR021183 -
Aip04g01907 172 Gene3D - 140 171 - -
Aip04g01907 172 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 84 164 - -
Aip04g01907 172 MobiDBLite consensus disorder prediction 92 110 - -
Aip04g01907 172 MobiDBLite consensus disorder prediction 111 127 - -
Aip04g01907 172 Gene3D - 13 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01907 Aip-Chr4 86172203 86176552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01907 130 164 G2-like Transcription Factor Family AT2G42660 77.143 5.55e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01907 K20792 - aip:110265077 119.398