Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01887 ATGGCTCAGGATGATGTGAAGCTCTTGGGGGTTGTGGGAAGCCCGTTTGTTTGCAGGGTTCAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATTTGTAACACAAGATTTGCAGAACAAGAGTGAAGAACTCCTAAAATACAACCCAATTCACAAGAAGGTGCCAGTGCTTGTTCACAATGAGAGGCCCATAAATGAGTCCCTTGTGATTGTTGAGTACATCGATGAAGCTTGGAAGGGCAAATCCATTTTGCCCACTGATCCTTACCAGAGAGCCCTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGGTGTTCGGTGCTGCATGGAAATCTGTTTTCACCGTTAACGAGGAAGAACGTGAGAAGAACGTTAAAGAAACACACGAGGCTCTTCAGTTTCTTGAAGATGAGCTTAAAGGCAAGTTCTTTGGAGGAGAGGAATTTGGCCTTGTGGACATTGCCGCTGTATACATTGCGTTTTGGGTGCCTCTGATTCAAGAAATTGCAGGTCTTCAACTGTTCACTAATGAGAAGTTTCCCAAACTCTACAAATGGAGTCAAGAATTTCTCAGTCAACCAACTATCAAAGAGTGTTTGCCTCCTAGAGACCCAATTTTGGCATTCTTCAAAGGTCGCTATGAAAGCCTTCTTGCCTCAGCAAAATAG 672 0.4375 MAQDDVKLLGVVGSPFVCRVQIALKLKGVEYKFVTQDLQNKSEELLKYNPIHKKVPVLVHNERPINESLVIVEYIDEAWKGKSILPTDPYQRALARFWAKFIDDKVFGAAWKSVFTVNEEEREKNVKETHEALQFLEDELKGKFFGGEEFGLVDIAAVYIAFWVPLIQEIAGLQLFTNEKFPKLYKWSQEFLSQPTIKECLPPRDPILAFFKGRYESLLASAK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01887 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 218 IPR045073 -
Aip04g01887 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Aip04g01887 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Aip04g01887 223 Coils Coil 119 139 - -
Aip04g01887 223 Gene3D Glutaredoxin 1 87 - -
Aip04g01887 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Aip04g01887 223 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Aip04g01887 223 Gene3D - 88 222 - -
Aip04g01887 223 CDD GST_N_Tau 6 79 - -
Aip04g01887 223 Pfam Glutathione S-transferase, C-terminal domain 108 195 IPR004046 -
Aip04g01887 223 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Aip04g01887 223 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Aip04g01887 223 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Aip04g01887 223 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 3 218 - -
Aip04g01887 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01887 Aip-Chr4 85211057 85212279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01887 3 221 Glutathione S-transferase Gene Family AT3G09270 52.703 8.58e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01887 K00799 - gmx:100500680 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01887 04 85211057 85212279 Aip04g01887 04 85211057 85212279 ECH