Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01863 ATGAATCTCCTCATTTTTCCACTACAATGGGGCTTTCTTCTTTTAACTTCTTCCTTATTATTGGCTTTATCCTCAACGGTGGAATACACTTTTAACATTGAAAATACAAGCATGCAACGGTTGTGCCATGAGGAATCCATAGTTGTAGTTAATGGAAGTCTCCCTGGACCAACCATTGATGTAAGAGAAGGTGACACTGTCATAGTTCATGTACTCAACCATTCGCCCTATAATATCACTATTCATTGGCATGGAGTTTATCAGCTTTTTAATGGTTGGGCAGATGGCACTGAATATGTAACTCAGTGTGGAATTGTCCCAAGAAACAGTTATACCTATACGTTCAATGTAACCGGGCAAGAGGGAACTCTCTGGTGGCATGCTCATTCATTTGATCTACGTGGCACTGTTTATGGTGCTTTCATAATTCGTCCTCCACTGGGTTCATCATATCCATTTCCTCAACCATATCAAGAACTTCCAATATTATTAGGTGATTGGTATAATGGTAATATCGTAGACATCGAGATAGAAGCACTCGCTGAGGGTCATGGTTCTAATTATTCAAATGCTTACACCATAAATGGCTTTCCGGGTGATCTCTACAATTGTTCACAAAATCAGACATACAAGATCAACGTGACTCAAGGAAAGACTTACTTGCTCCGAATGATGAATGCTGCACTCGATAGCCATTTTTTCTTCAAATTAGCAAATCACAGCTTCACAGTGGTTGCCGTTGATGCTTCATACACAGTACCATATCACACGGATATCGTTGTCATTGCCCCTGGACAAACCGTTGATGCTCTTTTCACAGCAAACCAATCCAACGGTTCATACTACATGGCTGCCTCTCCTTACAATGTCGGTGTGCCAGCGTTTGACAAAACGACAACACGTGGCATTGTCGTTTACGGCAATGATGAAAATGAAACCACCACACCACCCGTGATGCCAGTTTTACCAGTCGTCAACGACACAGCAACGGCTTTTACGTTTTATAGTAACCTCACAAGCCTAGTGGGGGCCCCACATTGGGTCCCTGTGCCACTTAACGTGGATGAGCGAATGTTCATCACTGTTGGATTAGGCTTAGAACATTGCCCCGAGGGTGCATCGTGTTCAGGTCCCAATGGAGAAAAATATTCTGCAAGCATGAACAACGAGTCTTTTGTGCTTCCTAAAGGAAGAAGGTTCTCGATGTTAGAAGCTTTCTATTACAATATGAGTGGCGTGTTCACTACTGATTTTCCTGACCATCCAGTATGGTTTGACTTCACAAACGAAAGTCTAAGTGATGACGCGGCAATCATGTATGCTCCCAAATCAACCAAGTCGAAGAGACTTAAGTTCAATTCAACGGTGGAGATTGTATATCAAAATACAGCACTTCTTTATGAGATAAATCATCCCATGCACATTCATGGTTATAGTTTCTATGTTTTGGCCCAAGGCTTTGGAGATTTCAATCCTAGGCTTGATCAAGCAAAGTATAATTTGATTAATCCTCAAATACGCAACACAATTGCTGTGTCTGCTGGAGGATGGGCTGTCATCAGATTTCAAGCAAATAATCCAGGGGTATGGTTTGTACATTGCCATGTGGATGATCACTTGGAATGGGGACTAGACATGACTTTTGAGGTTGAAAATGGACCAACTCCTTCAACTTCACTCCCTCCACCACCCATTGATATGCCTGAATGCGATATCAGTGCCAACATCTGCCTCCATCATCCTACTCCTTGGACCTCATTTCCATTCGATCTACCTCAGATCCGCATCACCGTCATCGTTTGTTCATCTCAGATTTACGTCGCCAAGGTCTTCCAGCCACCGTTGCTGCTCTTGTCACAACACCACACCTTAGCCGCTTGCACCGCCGCCATTCTTGCGTGTAGACGCACAAGATCGTCGCTGCCGGTAGTTGAGTTATCCATAACCAATATCGAAAAATACAAAGATAAACATGAGGATGATTGGAGATATCTTGCTGTTACTGCTTTTCTTGTTAAATGTGTGGGTTACAGGATATCTATTTGTTTTGTTGTTGTTGCCTGTTCAGATGCTACACTTATGTTACGGGCTTTAGTTTTGCCCTTCCGCCTATGTTATAACCCTCTTGAAAGGAGAAAGGTTTGTAAGGGAGGAAGAGAAGGTGGCAAGAAATCAGCCCAATCACAAGACTTCACCAAGGCTTCTTTAGCACCGAAATCTCACTCTTCTCATCCTACTCGAAGAAATGAAGTGTCGTCTACAAATGCTGCTGAAAGTCAAGCTGCAAAGAGGTCCTCTTCTTCTGGTGGCCCTTCTTATGATGTAAAGCTATCCATCAATAGCCTTGAGAAGGAGCACAATTTCTACTTTACGAAATTGAGGGATATTGAGATACTCTGCCAAACACCAGAGATAGAACGCTTATCGGGAGCTGTTTCTGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTTCCAAAGGCCTAAGCAACTGTGTTACCGGCAAAGGCTCAGAGATCGGTGACTTCCTTAGATTGCATCCAGGTGTGAACTGCATAAGACACGGCATTGCAATTTCAAAAAAGGCAGTGATGATTTCCCTGCAAACGGAGTTGGGAGGAAAAGATGCATGCATTGTACTTGAGGATGCTGATCTTGATCTTGGTTCCTTAAACTCAAGGATATAG 2691 0.43 MNLLIFPLQWGFLLLTSSLLLALSSTVEYTFNIENTSMQRLCHEESIVVVNGSLPGPTIDVREGDTVIVHVLNHSPYNITIHWHGVYQLFNGWADGTEYVTQCGIVPRNSYTYTFNVTGQEGTLWWHAHSFDLRGTVYGAFIIRPPLGSSYPFPQPYQELPILLGDWYNGNIVDIEIEALAEGHGSNYSNAYTINGFPGDLYNCSQNQTYKINVTQGKTYLLRMMNAALDSHFFFKLANHSFTVVAVDASYTVPYHTDIVVIAPGQTVDALFTANQSNGSYYMAASPYNVGVPAFDKTTTRGIVVYGNDENETTTPPVMPVLPVVNDTATAFTFYSNLTSLVGAPHWVPVPLNVDERMFITVGLGLEHCPEGASCSGPNGEKYSASMNNESFVLPKGRRFSMLEAFYYNMSGVFTTDFPDHPVWFDFTNESLSDDAAIMYAPKSTKSKRLKFNSTVEIVYQNTALLYEINHPMHIHGYSFYVLAQGFGDFNPRLDQAKYNLINPQIRNTIAVSAGGWAVIRFQANNPGVWFVHCHVDDHLEWGLDMTFEVENGPTPSTSLPPPPIDMPECDISANICLHHPTPWTSFPFDLPQIRITVIVCSSQIYVAKVFQPPLLLLSQHHTLAACTAAILACRRTRSSLPVVELSITNIEKYKDKHEDDWRYLAVTAFLVKCVGYRISICFVVVACSDATLMLRALVLPFRLCYNPLERRKVCKGGREGGKKSAQSQDFTKASLAPKSHSSHPTRRNEVSSTNAAESQAAKRSSSSGGPSYDVKLSINSLEKEHNFYFTKLRDIEILCQTPEIERLSGAVSALHMVHCFHLAGFSKGLSNCVTGKGSEIGDFLRLHPGVNCIRHGIAISKKAVMISLQTELGGKDACIVLEDADLDLGSLNSRI 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01863 896 Gene3D - 747 812 - -
Aip04g01863 896 Pfam Multicopper oxidase 160 308 IPR001117 -
Aip04g01863 896 PANTHER MULTI-COPPER OXIDASE 1 570 IPR045087 -
Aip04g01863 896 Gene3D - 20 146 IPR008972 -
Aip04g01863 896 MobiDBLite consensus disorder prediction 717 773 - -
Aip04g01863 896 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Aip04g01863 896 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Aip04g01863 896 SUPERFAMILY Cupredoxins 25 169 IPR008972 -
Aip04g01863 896 SUPERFAMILY Cupredoxins 153 345 IPR008972 -
Aip04g01863 896 SUPERFAMILY EB1 dimerisation domain-like 774 807 IPR036133 GO:0008017
Aip04g01863 896 CDD CuRO_2_LCC_plant 161 306 IPR034285 -
Aip04g01863 896 TIGRFAM laccase: laccase 26 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip04g01863 896 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Aip04g01863 896 Pfam Aldehyde dehydrogenase family 811 888 IPR015590 GO:0016491
Aip04g01863 896 PANTHER LACCASE 1 570 - -
Aip04g01863 896 Pfam Multicopper oxidase 421 552 IPR011706 GO:0005507|GO:0016491
Aip04g01863 896 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 757 828 IPR004953 GO:0008017
Aip04g01863 896 MobiDBLite consensus disorder prediction 725 773 - -
Aip04g01863 896 Pfam EB1-like C-terminal motif 782 807 IPR004953 GO:0008017
Aip04g01863 896 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Aip04g01863 896 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 813 892 IPR016162 GO:0016491
Aip04g01863 896 Gene3D - 374 578 IPR008972 -
Aip04g01863 896 Gene3D - 157 344 IPR008972 -
Aip04g01863 896 SUPERFAMILY ALDH-like 812 889 IPR016161 GO:0016491
Aip04g01863 896 SUPERFAMILY Cupredoxins 351 564 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01863 Aip-Chr4 83456546 83471908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01863 810 893 Aldehyde Dehydrogenase Gene Family AT2G24270 74.157 1.45e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01863 K05909 - gmx:100814392 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01863 04 83456546 83471908 Aip02g02169 02 91861548 91867369 PCT