Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01859 ATGAGCGTTCTATCAGTAATGAGGAGTTTGAGGTCTGAAGTTGATTCAGGAAACATCAAACCCTACTGTTATGTGGAGATTAATGGTCTGAAGTTGGCTTCACCAGAGAATATCTATTGGGTAAAGGATAGCAAATACCATGGATCTTCCAGAGAAGTTACTTCCTCGATATTGAGTCGAATGGGCATACAGAGGCTTTTCTTTGGCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCAAGTCGCCTTAAAGGAATCAATATATTTGAAAAGCAAGCCATAGAATTTGCTTCAAGAAAGGCTCAGCTATCTGAGTTTGTAAACGATGCTTTATTGTCATCAGTTTCATGCAAGCAGCCTTCCCAGCCACCTCCTCTCATGGTGCCCATTACTGTTATCAATGGAGCTACTGTCAAAAGAGCTGTATGTTTGGATGGAACATTGCCTGCCTATCACTTTCATCTTGGATCCGAATCAAGAGCAAATAGTTGGCTCATTGACTTAGAGCTTATAATGATGGCTGCATATCAAATGTAA 540 0.4 MSVLSVMRSLRSEVDSGNIKPYCYVEINGLKLASPENIYWVKDSKYHGSSREVTSSILSRMGIQRLFFGPYNYQQLQEIISSRLKGINIFEKQAIEFASRKAQLSEFVNDALLSSVSCKQPSQPPPLMVPITVINGATVKRAVCLDGTLPAYHFHLGSESRANSWLIDLELIMMAAYQM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01859 179 Gene3D - 55 111 - -
Aip04g01859 179 Pfam Pectinacetylesterase 125 170 IPR004963 GO:0016787
Aip04g01859 179 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 55 101 IPR020793 -
Aip04g01859 179 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 1 41 IPR020793 -
Aip04g01859 179 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 55 101 - -
Aip04g01859 179 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01859 Aip-Chr4 83287376 83289378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01859 1 41 Core DNA Replication Machinery Family AT4G14700 70.732 6.27e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01859 K02603 - pop:7467361 83.5741