Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01846 ATGAGTTTATATTCTAGTAGTGGTGGTGCAGCTTCTAGTAGTGGCCATCATCAACATCAACATCAACATCAACATCATCATCATCAAGTAGTTGAAGAGGTTTCAGTGCAAAGGGTGAAGAAGGAGGAGGTTAATGCAAAGATATCAGCATGGCAGAACAATAAGATTGCAAAGATTAACAACAGATTCAATAGAAAAGATACTGTTATTGAAGGTTGGGAGAGTGAGCAGACAAATAAGCTCTATCAGCTGTTGAGTAATAATCCTGTTGCCTTCTGCTTGCTTGTAGCCTGGAGGCAATGCTTTGGAAAAATGTACTTGGTTCAAGATTCAAGACAGCAGAAGAATATACTTGGTTCAAGTAGGAAGTTGGGACAGACGGGTCAAAGCTCCAACTCCAATGATGTCAAGACTTTTCGGGATAAAGATGACAAGGTTGACAAATTGCTTACTTCACCAACTCCCAAGGCTTCTGCAAAAGCTCTACCTTCAATGAGCCATGAAAATAATTTCTTGATTGTGCACCCAGACATTCTGCTGTCTGGAACAAGGGTTGCTGGCAGTTTTGGTTGCCTTAGGAGAACTGTCTTAGATGAGAGGCTAAAATGCAATGAGTACTCTACTGCAACATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTCACAGAATACAATTCATCTATTGAATTTTTGGATCTTAGAAGAATTGAACAAGTCGCCAGGAGAAAGAATTGA 744 0.4046 MSLYSSSGGAASSSGHHQHQHQHQHHHHQVVEEVSVQRVKKEEVNAKISAWQNNKIAKINNRFNRKDTVIEGWESEQTNKLYQLLSNNPVAFCLLVAWRQCFGKMYLVQDSRQQKNILGSSRKLGQTGQSSNSNDVKTFRDKDDKVDKLLTSPTPKASAKALPSMSHENNFLIVHPDILLSGTRVAGSFGCLRRTVLDERLKCNEYSTATLTGTLLHQIFQAGLTEYNSSIEFLDLRRIEQVARRKN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01846 247 PANTHER OS02G0116800 PROTEIN 10 80 - -
Aip04g01846 247 MobiDBLite consensus disorder prediction 119 139 - -
Aip04g01846 247 Pfam DNA replication factor Dna2 165 235 IPR014808 -
Aip04g01846 247 Pfam Remorin, C-terminal region 43 86 IPR005516 -
Aip04g01846 247 MobiDBLite consensus disorder prediction 1 32 - -
Aip04g01846 247 MobiDBLite consensus disorder prediction 1 17 - -
Aip04g01846 247 PANTHER REMORIN 4.2 10 80 - -
Aip04g01846 247 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01846 Aip-Chr4 82333249 82335974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01846 165 234 Core DNA Replication Machinery Family AT1G08840 62.857 1.61e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01846 K10742 - adu:107489017 145.591