Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01841 ATGCCTTCAGTTGCCATTATCGTTTTTGTAACATGTCAGATAAGGAAATTGCTTTTCCAGAGGAGTGATAACAGTTGGAAGAAAAGTAAAACACATTATATAGTAGCTTCTTACCTTCGGCCATTACTTTTATGGACTGGAGCAATACTCTTTTGCAGAGCATTACAACTAGTAATTCTACCTACAGAAACTAGCCAGGTTATAAAGGAACGACTTCTGCATTTTGTAAGATCATTGTCAACTGTTCTGACCTTTGCCTATTGTTTATCAAGTGTGATTCAGCAAACGCAGAAATTCTTATCTGAGAGCACTGATCCAAGTGAGACGAGAAATATGGGATTCCAATTTGCAGGAAAAGCTATCTATTCGGCCGTATGGACCTTTTCACCGTTCATTGAATTGCTAGGCTTCTCTACATAG 420 0.3833 MPSVAIIVFVTCQIRKLLFQRSDNSWKKSKTHYIVASYLRPLLLWTGAILFCRALQLVILPTETSQVIKERLLHFVRSLSTVLTFAYCLSSVIQQTQKFLSESTDPSETRNMGFQFAGKAIYSAVWTFSPFIELLGFST 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01841 139 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 10 139 IPR045042 -
Aip04g01841 139 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 10 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01841 Aip-Chr4 82247950 82249309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01841 1 139 Mechanosensitive Ion Channel Family AT5G10490 60.811 3.03e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01841 K22047 - gmx:100789444 212.231