Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01823 ATGACACTATTTCAACCCAGTCCCCAACTCTTTCACCCTGGCTACCCTAATCTAATCGATCGAGCTCACATCCCCTTTCACCCTGGCCACCCTAATCGATCGAGTTCACAACAGCGCCGCAGCCCCACTCCCCCTTTTTCCCTCTCCAACGCACACAACACAATACTCACACGCACCACCTCACGCACGCGGAAGAGGAGAGCTCGAGGAAGGAGACGCCACTTTGCTGCCAGCTCCGTCGAAGACCAGCCCGCCGCCGCTGTCGAGTCAAACCCGAGAGAGTCCGTCACCAAACGCATCATCGCCGCTGGAGGAGCTTCGCACTTCGCCACCGCCGAGGAGGGGAAAGAGGAGCTGCTCCCTCGCCAGTCACCGTCGTGCTTCCTGGTTGCCGATGAGGGAGCCGCGAGAACCGTTGCAGCTGTTGACTGTAAGCACTCCAAATCATTGAAAAAGGGTGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATATCCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTCTTTGCTGATGGAGTTAATCAGCACATGGTTGTACTTATGGCTGCAAGGGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCAATTGTATCTATGTTAGCAGACCCAAAGGAGGTGATCAGCTTGCAATTACTAAGGAAACAGGAAGGCATCTTGGAATGGGCTCTAACATATGGTTTTGCTGGTGTCTTTCCTGAGCACAAATATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCAGACATAGGTATCGCTGTAGCAGATGCAACAGATGCTGCAAGAAGTGCCTCTGATATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAAAGAATGAAAAACTACACAATATATGATGTATCTATCACCATCCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTTAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAACGATGAATCCACTCTTCATTGCCGATTTCAATGGCTTTTGCCTCCGTCAACAATAATCACACCCCTTATTCCACTCTTCACTGCTGATTTCACTTCCTTCTTTCTCTCTCTCTCTCTCCCGTACATACTCTCTGTCATTGCCCACGCTCTTTCTCGCACTCCATCGCCGTTGCCCAGCACCCAGGTCATTTTCGTGCTCCGTTGCTGTTGCCCAGCACCCACATCTCTCTCGCGCTCTCATGCTCTCACTCTCGCACTCCATCGCTATCACCCAGCACCCGTCGGCAGCTCTTCTTTCTATGCTGCCATCTCCTCCACCTTCCTTCCTCTCCTTTCTTTCTTCTCTCTCTATTCTGATTTTGAGATATATTTGATATTATTGTTGTTGGTATTATTGTTCTAA 1530 0.4791 MTLFQPSPQLFHPGYPNLIDRAHIPFHPGHPNRSSSQQRRSPTPPFSLSNAHNTILTRTTSRTRKRRARGRRRHFAASSVEDQPAAAVESNPRESVTKRIIAAGGASHFATAEEGKEELLPRQSPSCFLVADEGAARTVAAVDCKHSKSLKKGAITKRMTAIEEMAGMDILCSDKTGTLTLNKLTVDKNLIEVFADGVNQHMVVLMAARASRLENQDAIDCAIVSMLADPKEVISLQLLRKQEGILEWALTYGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYDVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDESTLHCRFQWLLPPSTIITPLIPLFTADFTSFFLSLSLPYILSVIAHALSRTPSPLPSTQVIFVLRCCCPAPTSLSRSHALTLALHRYHPAPVGSSSFYAAISSTFLPLLSFFSLYSDFEIYLILLLLVLLF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01823 509 PANTHER CALCIUM-TRANSPORTING ATPASE 149 233 - -
Aip04g01823 509 PANTHER CALCIUM-TRANSPORTING ATPASE 252 380 - -
Aip04g01823 509 PRINTS H+-transporting ATPase (proton pump) signature 251 267 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01823 509 PRINTS H+-transporting ATPase (proton pump) signature 279 295 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01823 509 PRINTS H+-transporting ATPase (proton pump) signature 310 335 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip04g01823 509 ProSitePatterns E1-E2 ATPases phosphorylation site. 174 180 IPR018303 -
Aip04g01823 509 SUPERFAMILY HAD-like 170 360 IPR036412 -
Aip04g01823 509 MobiDBLite consensus disorder prediction 21 93 - -
Aip04g01823 509 Gene3D - 151 168 - -
Aip04g01823 509 Gene3D - 317 387 - -
Aip04g01823 509 PANTHER PLASMA MEMBRANE ATPASE 252 380 - -
Aip04g01823 509 Gene3D - 184 233 IPR023299 GO:0000166
Aip04g01823 509 Gene3D - 252 316 IPR023214 -
Aip04g01823 509 Gene3D - 169 183 IPR023214 -
Aip04g01823 509 MobiDBLite consensus disorder prediction 30 58 - -
Aip04g01823 509 MobiDBLite consensus disorder prediction 59 73 - -
Aip04g01823 509 Pfam haloacid dehalogenase-like hydrolase 251 293 - -
Aip04g01823 509 PANTHER PLASMA MEMBRANE ATPASE 149 233 - -
Aip04g01823 509 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 254 359 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01823 Aip-Chr4 79095377 79104055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01823 151 380 Primary Pumps ATPases AT4G11730 50.171 1.48e-73 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01823 K01535 - aip:107607271 330.102