Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01820 ATGTTATTGTCGCCGTTCATCTCCTCGTTGCTGTTCATCTGCTCGTCGCCATTCATCTCCTCACCACCAGCTTCTGAGGTCTGGTTCTTTGGCTTCAATTTGCGGATTCAATCTGGTTCTCTAGCTGCTGCGAAGCTATTGTTGCTGCCTCTGACTAAGGGTGAGGAGCAAAAGAAATTGAACGTGCTTTCTAATGAGGTGTTTGTTAACGCCTTAATCAGTAGCGGGCGCGCTGTAAAAGAGCTTGAAGATGCTATTTTTGAGAAGCCAAAACAGCAGGGAAAATATATCATTGTATTTGATCCTTTGGATGGATCCTCAAATATTGAATCTGGTGTTTCTATTGGAACTAAACTATTAAAGCTTCTGCTATGGTCCGAGCGATCACCATTGTCAACCTTAGTGCTTTCCAAAAAGGGTAGAATCTGCTATCCAAGTTGGTGCCTCAACAAGAACAAGTCAGAGGCTAGTGTCTTTGAGAATTCTCCAAGACATGATGCATTTGTACCCAAATTTGAAGCTAACCTTGCTCAGTTCTGTGAGAAATTGGTAATGGACTTGGATAGAAGACTAAGACGTGGGCAAGAATGCCTTGCTCAAGAGAGAGAACAGGAAGAAAAGACCCTCTTGATGGCCTCAATCATTTTCTACAGAACAAGAATCTCTTACTTCATTAAGGATGCAATTCCATTGAGCCAGCAATTGGAACACTACAAAGAATGTCAGAATATATTGGTGGAAGTAGTAGGACAATCAAATACTTCATCAATCATATCTGGTGCTACACATCTTCTAGGTTGGCAAGCGAGTGGTGATGATCCGTGTGGACAATATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAAAGATTAAATTATCCAATCTTAAACTAACGGGAACATTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACCTAGACCTGAGTAGCAACAATCTTGGAGGTGGCATATCATACCAGCTTCCTCCAAATATGCAGCGCTTGGGAGTAATGACTACCCTTTGTAGAGGCACTCTGACTTGGCTGCGCTCGATGCTTTTCTAA 1074 0.4227 MLLSPFISSLLFICSSPFISSPPASEVWFFGFNLRIQSGSLAAAKLLLLPLTKGEEQKKLNVLSNEVFVNALISSGRAVKELEDAIFEKPKQQGKYIIVFDPLDGSSNIESGVSIGTKLLKLLLWSERSPLSTLVLSKKGRICYPSWCLNKNKSEASVFENSPRHDAFVPKFEANLAQFCEKLVMDLDRRLRRGQECLAQEREQEEKTLLMASIIFYRTRISYFIKDAIPLSQQLEHYKECQNILVEVVGQSNTSSIISGATHLLGWQASGDDPCGQYWKGITCSNNRVTKIKLSNLKLTGTLPYGLQPLTSLTNLDLSSNNLGGGISYQLPPNMQRLGVMTTLCRGTLTWLRSMLF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01820 357 Pfam Leucine rich repeat N-terminal domain 261 285 IPR013210 -
Aip04g01820 357 SUPERFAMILY L domain-like 269 338 - -
Aip04g01820 357 SUPERFAMILY Carbohydrate phosphatase 53 117 - -
Aip04g01820 357 Gene3D Ribonuclease Inhibitor 251 351 IPR032675 -
Aip04g01820 357 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 259 351 - -
Aip04g01820 357 Gene3D - 43 119 - -
Aip04g01820 357 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 53 117 IPR033391 -
Aip04g01820 357 PANTHER OS01G0253100 PROTEIN 259 351 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01820 Aip-Chr4 78793166 78799587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01820 267 356 Strubbelig Receptor Gene Family AT3G14350 54.444 8.29e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01820 - - ahf:112716278 159.073