Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01819 ATGCATGCCTCCCCAAATCTTCTGATTTCTGATTTGTGCATGGTCGAAGACGTTATTGGAGCAACGTTAGCGTTAACAATGCTATATTACTCCCATTTTGGCGTTATCGACATTGATAACACTGGTGACACCCTTGGAAGTGGCGTTAGTGCTGGCGTTGCTGGCGTTATTGCTGGCATTACCAGCATTGGCAACGTTGATGCTGGCGTTGttgccagctcacttcttgtcggtgccagctctgttccacaccaccacgtcggccactgtctttccagccactgtcccCAACCACTTCCACACCCTCGCCAGCTCTGCCCTGTTCCAGCCTTCCAGGATCTAGCTTCTAGCCTAGctgTCATTGGAGCCATTCACACAACCACTTTGGCCAAGCTCTCTGCTAAAAGGCAAGAAGTTCTTTCTCCAGCAGGAAACATTGTTGAACAGGTCAATAATACACCAAAACTATTGTTCAAAACTTCAAATCAGAGTGGTGTTGGGCTGTTGGCATTTGTTGGGGAGAATAGAGCACTGCAAGGTTACTCATCTGCACTGAGGATTGCTCAGCAGCGGCTCCGAAAAGAGCATGGTTGTGTCCCTCATAGAGAGATTCTATCAGGACAAGTTTTGCTAGATGGAAATGATGTTAAGAGTTTGAAGCTAAAATGGTTGAGTCAGCAAATAGGACTAGTGAGTCAAGAACTGGCTTTGTTTGCGATAACAATTAGAAAAAACATGCTCTTAGAAAGATCTGATGCTGACCAAGTTGAGATTAAAGAAGCTACAAGAGTAGCCAATGCTCATTCTTTCATTATCAAACTTCCAGAGGGTTATGAAACACAAGTCAGCAATATAGAGTTTCAATTTCTATTCTGA 876 0.395 MHASPNLLISDLCMVEDVIGATLALTMLYYSHFGVIDIDNTGDTLGSGVSAGVAGVIAGITSIGNVDAGVVASSLLVGASSVPHHHVGHCLSSHCPQPLPHPRQLCPVPAFQDLASSLAVIGAIHTTTLAKLSAKRQEVLSPAGNIVEQVNNTPKLLFKTSNQSGVGLLAFVGENRALQGYSSALRIAQQRLRKEHGCVPHREILSGQVLLDGNDVKSLKLKWLSQQIGLVSQELALFAITIRKNMLLERSDADQVEIKEATRVANAHSFIIKLPEGYETQVSNIEFQFLF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01819 291 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 206 288 - -
Aip04g01819 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 284 IPR027417 -
Aip04g01819 291 Gene3D - 205 282 IPR027417 -
Aip04g01819 291 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 118 192 IPR039421 -
Aip04g01819 291 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 206 288 IPR039421 -
Aip04g01819 291 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 118 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01819 Aip-Chr4 78710566 78715311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01819 206 282 Calmodulin-binding Proteins AT2G36910 76.623 7.53e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01819 K05658 - gmx:100777382 127.102