Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01812 ATGCCTTCACCTCCCTCATCCTTCGCAACCATTTCTCGTAACCGCACTGTCTTCTCTAGAAAATGGACCAACAAGGAATACGCAATCGCATTCACAAGCTTCTCCTTCACACTCATCCTCTTCTCCCTCACTCGCCGCCCCAACCTCCAAGAACCTTCTAGAATCTCTTCTTCCAATCACCTTGTTCCCTTGACCCTCCTCTCGAATGCCACCCAAAGAGGCGCACTTTGCTTGGATGGGAGTGCCCCTGGGTACCACTTTCAGAAGGGATTCGGGTCCGGATATCAAAATTGGCTACTTCACATTGAGGGAGGTGGGTGGTGTGAGTCGGTAGCTTCGTGTTATCAGCGAAAAATGACTGCGTTGGGTTCGTCCAAGCACATGGAAACAGAGGTTCCTTTCTCTGGAATATTAAGCTCTGACCCTTCTCAAAATCCTTATTTCTTTAACTGGAACAAGGTGAGGATACGCTATTGTGATGGTGCATCTTTTGCTGGCCACCAAGAAAGTGAGATTAAGGATGGAAATGGCTTGTTCTTCAGAGGCCAGATCATTTGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCACTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTAATACATTGTGATGACTTCCGAAAATATTTTTCGAAAGACATAAATGTTAAATGTCTTGCTGATGCTGGGTTTTTCCTAGACGAGGAGGATGCTATTCGAAATAGGACAATGAGATCTTTCTATCATGACGTTGTTCAGCTTCAGGGTGTTGCAAAAAGTTTACACAAAGATTGCATTGCTAGAATTGAACCATTTAAGTGTCTTTTTCCATTAGAAATTGTTAAGAACATAAAGACTCCAGTGTTTTTTGTCCACCCTGCTTATGATTTTTGGCAGATACAAAATATTTTGGTACCTCATGGTTCAGACCCCCATGGTTACTGGAAAAGCTGCAGATTGAACATTCCCAATTGCAATGCTGATCAGTTTGATGTACTTCATGGTTTCCGTAAATCATTGCTGAAGAGACTCAACGAGTTCCAGCAACGAAAGGAGATTGGAATGTTCATAAATTCCTGCTTTATTCATTGCCAGACAGCGATGGGAGAGACATGGCACTCCCACAATTCCCCTAAAATAAATGATAAGACAATTGCTGAAACTGTCGCTGATTGGTACTTTGACCGCAAAGTTCTCAAGCTAATTGACTGCCCTTATCCGTGCAATCCCACTTGCCGCAATATGGATTTCACCAGAAAATAA 1293 0.4331 MPSPPSSFATISRNRTVFSRKWTNKEYAIAFTSFSFTLILFSLTRRPNLQEPSRISSSNHLVPLTLLSNATQRGALCLDGSAPGYHFQKGFGSGYQNWLLHIEGGGWCESVASCYQRKMTALGSSKHMETEVPFSGILSSDPSQNPYFFNWNKVRIRYCDGASFAGHQESEIKDGNGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLATLIHCDDFRKYFSKDINVKCLADAGFFLDEEDAIRNRTMRSFYHDVVQLQGVAKSLHKDCIARIEPFKCLFPLEIVKNIKTPVFFVHPAYDFWQIQNILVPHGSDPHGYWKSCRLNIPNCNADQFDVLHGFRKSLLKRLNEFQQRKEIGMFINSCFIHCQTAMGETWHSHNSPKINDKTIAETVADWYFDRKVLKLIDCPYPCNPTCRNMDFTRK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01812 430 PANTHER NOTUM-RELATED 23 422 IPR004963 GO:0016787
Aip04g01812 430 SUPERFAMILY alpha/beta-Hydrolases 185 316 IPR029058 -
Aip04g01812 430 Pfam Pectinacetylesterase 57 407 IPR004963 GO:0016787
Aip04g01812 430 PANTHER PECTIN ACETYLESTERASE 4 23 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01812 Aip-Chr4 77780433 77790389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01812 20 394 Carbohydrate Esterase AT3G09410 59.269 6.65e-170 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01812 K19882 - gmx:100792819 617.846