Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01802 ATGGCTACTCTTGGCTCCAAGGTCAGAGTGATAGTTAGGGTTAGACCCTTTCTTCCTCAAGAGATCTCTTCAAGAAATGGCGACCCAGTTCCGTGTGTCTCCGTCCTGGACCAACATTTCGAGTCTGCAGAAGATGAAGTTGCCGTTTATCTCAAAGATCCACAAACCAGCCGAAAGGAGTGCTACCAATTGGACTCATTCTTTGGGGTAGAAGATAATAATGTGGGTCAGATATTCAGCAAAGAAGTGAGCCCTATGATACCTGGAATCTTCAGTGGCTGCAACGCCACGGTTTTCGCTTATGGAGCCACTGGCAGTGGCAAGACATACACCATGCAGGGGACTAAGGACCAACCTGGCTTGATGACACTGGCTATGTCTATGATACTGTCCATTTGCCGAAACAGTGGCAGGACTGCAAATATTTCATACTATGAGGTCTACATGGACAGATGCTATGACCTCTTGGAGGTCAAAGCAAAAGAGATTTCAGTTTGGGATGACAAAGATGGCGAAATCCACCTCCGTGGACTCTCTCAGATTCCCATAAACACAATGTCTGAGTTTCATGATGTTTTCTCGAGCGGAGTTCAGCGGCGTAAAGTTGCTCACACTGGCCTCAATGATGTCTCTAGTAGGAGCCATGCAGTCCTTATGATCTCTGTCTCCACTCCTTCTGCTGATGGCACTGAAGCAGCTGTATTCGGAAAGTTGAATCTCATTGACTTGGCAGGTAACGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGGTAAGATAAACCAATCCTTGTTTGCACTGTCAAATGTGATCTATGCATTAAACAACAACAAACCACGAGTTCCCTACCGCGAAAGCAAATTGACCCGCATATTGCAAGACTCTTTAGGGGGAACTAGTCGTGCATTGATGGTCGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTAGATCAAGGCATGTGTCTAATTTTGTGCCTTCAGCTCAAAAACAAGAGACTCCAAAAGTTAAAGTGGACATGGAAGCCAAACTGAAAGCTTGGCTAGAATCAAAAGGCAAAACGAAGAGTTCACAAAGATTTGCTGCATCTATCTCTCTGTTTCCAAGAAAAACTCCAAGTTCGGTCAAAATCTCTGCAAAGAGATGTGTTACTTTCGATAGTTCAGTGAAGGGAGGAAGAACTGGAATTAATGAATCCGCACAACATACAAAAGAAAGTGCCTTTGCTGTGTCGTTTGGAAATCTACTGGATAGTCCAGATCCGTTCAATACTTGCTTGGAGGAGAATGAAAATTGTGGTGTTAAAAGCAACGATAAGCAAGAATCTGAGCATTATACCAATAAGTCTTCATGGGAGCCATGTAAAAATCTCCCTGCTGAGCCATTGGCCAAGGTGATGAACTCGCCAATTACAAATGAGAGCAAAAATGCAGCCCAAAGTCCTTTAAGAAAACCCCTCTCCCCTCCCAACATCAGTGTTAATCAAAAGCCCCTTGAAGCATTCCCTTTCTCGCAAACACCTTTTACAGAAACCTGCTCCACTAACAAAGGGAAAATACAAAAGAATGACACTCCGCTTGACAAATTCAGTACACGAAGTTCTGCGTTGAAGAATACTCTAGTTCAAGAATACATTGATTTCTTAAACAATGCAAGCAGAGAGGAACTACTAAAGTTAAAGGGCATAGGAGAGAAGATGGCAGAATATATAATAGACCTTAGGGAAGAAAGTCAAATTGAATTATCTGATACTGTTAGTGATCCTGTTTGGTTTTGA 1815 0.4331 MATLGSKVRVIVRVRPFLPQEISSRNGDPVPCVSVLDQHFESAEDEVAVYLKDPQTSRKECYQLDSFFGVEDNNVGQIFSKEVSPMIPGIFSGCNATVFAYGATGSGKTYTMQGTKDQPGLMTLAMSMILSICRNSGRTANISYYEVYMDRCYDLLEVKAKEISVWDDKDGEIHLRGLSQIPINTMSEFHDVFSSGVQRRKVAHTGLNDVSSRSHAVLMISVSTPSADGTEAAVFGKLNLIDLAGNEDNRRTCNEGIRLQESGKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAQKQETPKVKVDMEAKLKAWLESKGKTKSSQRFAASISLFPRKTPSSVKISAKRCVTFDSSVKGGRTGINESAQHTKESAFAVSFGNLLDSPDPFNTCLEENENCGVKSNDKQESEHYTNKSSWEPCKNLPAEPLAKVMNSPITNESKNAAQSPLRKPLSPPNISVNQKPLEAFPFSQTPFTETCSTNKGKIQKNDTPLDKFSTRSSALKNTLVQEYIDFLNNASREELLKLKGIGEKMAEYIIDLREESQIELSDTVSDPVWF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01802 604 Pfam Helix-hairpin-helix motif 561 583 IPR000445 GO:0003677
Aip04g01802 604 Pfam Kinesin motor domain 13 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 ProSitePatterns Kinesin motor domain signature. 236 247 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip04g01802 604 MobiDBLite consensus disorder prediction 445 465 - -
Aip04g01802 604 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 PRINTS Kinesin heavy chain signature 205 222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 PRINTS Kinesin heavy chain signature 93 114 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 PRINTS Kinesin heavy chain signature 237 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 MobiDBLite consensus disorder prediction 445 461 - -
Aip04g01802 604 Gene3D Kinesin motor domain 3 375 IPR036961 -
Aip04g01802 604 Gene3D - 546 591 - -
Aip04g01802 604 ProSiteProfiles Kinesin motor domain profile. 7 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 PANTHER BNACNNG40390D PROTEIN 5 594 - -
Aip04g01802 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 363 IPR027417 -
Aip04g01802 604 SMART kinesin_4 5 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip04g01802 604 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 5 594 - -
Aip04g01802 604 CDD KISc_KID_like 8 332 - -
Aip04g01802 604 SUPERFAMILY RuvA domain 2-like 553 589 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01802 Aip-Chr4 76350081 76354488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01802 4 366 Calmodulin-binding Proteins AT5G65930 32.440 8.99e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01802 K10403 - gmx:100804591 900.582