Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01796 ATGGGTAACCGAATGGGTAAGCTCTGCGTCTGCTCCTCCGACACTGCCGGAGAAATCTCCGGCAGATTCGACAACGGGATAACCTTCCTCTCCGATTCACATGACAAAGCTCTTGGAGACTCCATCTGCTATGTGAGACCAGACAATTCTCAGTTCTCCCGTGGCGGCGGCGGCAATGTGTTTTCGGACGGCAGCGCCACCTTCGTTACTTTCCGGTCTGTGTCCGGGGCCACCGTGAGTGCAAACACGTCGTCAACGCCTTCTACCTCCCTTGATGATTCTCTTCAGCAAGAGACAGCTTTGGATTCCTCTGCTTCATTTGAGAGTTCAGGTTCCTTCGCTTCCACAATAATGGTGCCTCTGCAACCGCAACCACACGCTCCTGCTGATGAATTCTTTATTCATACCTTTCCAAAGAGCCCGTTGAATAATGGTGTCTCGAACGGTCAAATAGGTGATGAGAAAGCTTATGGTTATGAACATGCCAATAACAAAACATGTGGGCCAAGTTTGAAGAAGTTGCTGAGTGGATCGTTTCTCCCCAAGGAGAAGAGACCGATTTTCAAGAACAACGGGAATGCTAACGCCAGAGTGGGTTGTAGCACTAATTTGAGTGACGAACCAAAGTTTCATAACGTTGTTGTTGTTGATGATGATGACGACGATGATAAGTGTAATTTGTCAAAGGGGTGTCAGAACTTACATTGGGCTCATGGTAGAGCCGGCGAGGATCGTTTACATATCGTGATTTGCGAGGATCATGGGTGGATTTATGTTGGGATTTACGATGGATTCAATGGTCCTGATGCCACTGACTATCTTCTGAACAATTTGTTTTATGCTGTTTATGAAGAACTCAAGAAGATAGTGGGTTGTCAAGATTCCAAATCGTTGGTGGATGGTGGTTCTTATTTTTCCTCAAGTTTCAATAAAGAAAACAATCCAACAGGAAATGGAAACTTGAAAGTAGAGAGAAGGAATAGCAGAAATTGCAAGAAAGAGGTGAAACTGAATGCGAAATTGAGTGAGTGGGATGTTTTGCAAGGTCTTTCGAAGGCGCTGAGGATAACGGAGGCGGCGTTTCTTAAGAGTTCAGATGAGATGATAGCTCAAAATCCGGTGTTGGCTATGATGGGTTCTTGTGTGTTGGTTATGTTGATGAAGGGGGAAGATGTGTACTTGATGAATGTTGGAGATAGCCGCGCTGTGTTGGCAACTCACGATGGGAATTCTCTTCAGCTTACTATGGAGCATAGCACTCATGTCAAAGAGGAGGTTCGTAGAATATGGAGGGAGCATCCAGATGACCCTTCTGCTGTAACTAAAGGAAGGGTTAAAGGTTACTTGAATGTCACAAGGGCTTTTGGGGCCGGCTTCcttaagcagCCTAAACAAAACAATGCAGTGTTGGAGACATTCAAAGTGAACTACATTGGAGACTCCCCATACATTACATGCTGCCCTTCACTCCACCACTATAGGCTCGGTCCAAATGACAAATTCCTCTTACTCTCTTCTGATGGAATTTTCCAATACTTCACCAATGAAGAAGCAATTTTTAAAGTGGACTACTTCATCACTATGTTCCCAGACATAGATCCTGCACAACTTCTCATTGAAGAAACACTGCACAGAGCAGCCAAAAAAGCTGGTATGAATTTCCATGAGTTGCTTGATATCCCACAAGGAGAAAGACGACTTTACCATGATGACATTTCTGTTGTCATAATCTCTTTGGAGGGAAAAATATGGCGTTCGACAGTATAA 1767 0.4443 MGNRMGKLCVCSSDTAGEISGRFDNGITFLSDSHDKALGDSICYVRPDNSQFSRGGGGNVFSDGSATFVTFRSVSGATVSANTSSTPSTSLDDSLQQETALDSSASFESSGSFASTIMVPLQPQPHAPADEFFIHTFPKSPLNNGVSNGQIGDEKAYGYEHANNKTCGPSLKKLLSGSFLPKEKRPIFKNNGNANARVGCSTNLSDEPKFHNVVVVDDDDDDDKCNLSKGCQNLHWAHGRAGEDRLHIVICEDHGWIYVGIYDGFNGPDATDYLLNNLFYAVYEELKKIVGCQDSKSLVDGGSYFSSSFNKENNPTGNGNLKVERRNSRNCKKEVKLNAKLSEWDVLQGLSKALRITEAAFLKSSDEMIAQNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATHDGNSLQLTMEHSTHVKEEVRRIWREHPDDPSAVTKGRVKGYLNVTRAFGAGFLKQPKQNNAVLETFKVNYIGDSPYITCCPSLHHYRLGPNDKFLLLSSDGIFQYFTNEEAIFKVDYFITMFPDIDPAQLLIEETLHRAAKKAGMNFHELLDIPQGERRLYHDDISVVIISLEGKIWRSTV 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01796 588 CDD PP2Cc 241 579 IPR001932 -
Aip04g01796 588 Gene3D - 208 585 IPR036457 -
Aip04g01796 588 ProSiteProfiles PPM-type phosphatase domain profile. 226 579 IPR001932 -
Aip04g01796 588 SMART PP2C_4 227 577 IPR001932 -
Aip04g01796 588 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 18 588 - -
Aip04g01796 588 SUPERFAMILY PP2C-like 240 580 IPR036457 -
Aip04g01796 588 Pfam Protein phosphatase 2C 318 527 IPR001932 -
Aip04g01796 588 PANTHER PROTEIN PHOSPHATASE 2C 18 588 IPR015655 GO:0004722|GO:0006470
Aip04g01796 588 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01796 Aip-Chr4 75976086 75979916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01796 1 588 PP2C-type Phosphatase Gene Family AT1G07630 43.088 2.31e-161 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01796 - K01102 gmx:100804061 670.233