Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01784 ATGTATCCCCTTCAATTTCATTTGGAAATTCCTAAATTCCCCTTGATCCTCTCCATGCCGATGACCCCTCTGCTCTTCAGATCCGTGTGCCAGAAGGTGTTGATGGTTTTGGGTGCAGCAGGAGGTGTAGGGCTTGCAGCTGTTCAAATTAGAAAAGTGTGTGGTGCCATTGTCATTGCTGTTGCTAGTGTGGTAGACCTTGAGAGAGGTGCTTACCCTGTATTAGATGATTTGGCTAGAAATGTTAGTACCAAAAATCTTGAACATGTGCGAAGTTTGAAGAGCAATTTTATGCATTTTCTGGCACGGGTGCAGAAGGTACGGGATGAAATTGAACATCTGTTAGATGACAACGAAGACATGGCACAACTATATTTGACAAGGAAGTGGTTGCAGAATCAGAAACTTGATGCTCATGTGGGGGCCACAACCTTGAACAACCTTTTTAATACTCGTCGACTTGGTTCTACCAGAAGTGGAAGTTTGGTAACTAGTAACTTAGGGGATGATAATGACATGGAGGATCTGGAAATGTTGCTTGAAGCATATTTTATGCAGTTGGATGGAACTCGTAACAAGATATTGTCTGTCATTCCATTCCGACGCTTCTATGGTGGTGTTGGAAGGACTGCCCAGGCAAAGAACAGACATTCCAATGGACAAGGATGCTGGCCTGTAAAATCAGCTAAATTCATCCTTGATTTGCTCAAGAATGCTGAGCGCAATGCTGAGGTGAAAGGTTTCGATGTGGATGCTCTTTACATTTCCCACATCCAAGTCAACCAAGCATAG 792 0.4356 MYPLQFHLEIPKFPLILSMPMTPLLFRSVCQKVLMVLGAAGGVGLAAVQIRKVCGAIVIAVASVVDLERGAYPVLDDLARNVSTKNLEHVRSLKSNFMHFLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQKLDAHVGATTLNNLFNTRRLGSTRSGSLVTSNLGDDNDMEDLEMLLEAYFMQLDGTRNKILSVIPFRRFYGGVGRTAQAKNRHSNGQGCWPVKSAKFILDLLKNAERNAEVKGFDVDALYISHIQVNQA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01784 263 Pfam Ribosomal protein L22p/L17e 216 263 IPR001063 GO:0003735|GO:0005840|GO:0006412
Aip04g01784 263 Gene3D Magnesium transport protein CorA, transmembrane region 56 195 - -
Aip04g01784 263 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 62 197 IPR039204 -
Aip04g01784 263 Gene3D Ribosomal protein L22/L17 196 263 IPR036394 GO:0003735|GO:0005840|GO:0006412
Aip04g01784 263 Coils Coil 104 124 - -
Aip04g01784 263 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 71 IPR036291 -
Aip04g01784 263 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 62 197 - -
Aip04g01784 263 SUPERFAMILY Ribosomal protein L22 196 263 IPR036394 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01784 Aip-Chr4 75478688 75482964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01784 63 197 MRS2 Gene Family AT3G58970 66.197 1.70e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01784 K16075 - gmx:100812561 203.371