Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01767 ATGGAAGAAGACTTCGACATGCCCCAAGCTGAGGAGATGAACGAAGACTTTGATCTCCCCGACGAGGACCCAATCCTAAAGGTGGGCGAGGAGAAGGAGATCGGAAACCAAGGCCTCAAGAAGAAGCTCCTCAAGGAAGGTCAAGGCTGGGATACCCCCGAAGTTGGTGATGAAGTCGAAGTTCACTACACGGGGACTCTGCTTGATGGAACGAAGTTCGATTCGAGCCGCGATAGGGATAGCACTTTCAAGTTCACTCTCGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGCATTAAAACCATGAAAAAGGGGGAAAATGCTCTTTTCACCATCCCTCCTGCGCTAGCCTATGGTGCATCTGGCTCACCTCCAACTATTCCTCCGAATGCAACACTCCAGTTTGATGTCGAGCTTTTGTCTTGGACTAGTGTAAAGGACATATGTAAGGATGGTGGTATATTTAAGAAAATACTTAAGGAGGGGGAAGGATGGGAAAACCCCAAGGATCCTGATGAAGTATTAGTTAAGTATGAGGTTCTTCTGGAAGATGGAAAGGCTGTGGCTAAGTCTGATGGAGTGGAGTTCAGTGTCAGAGAGGGTCACTATTGTCCTGCATTGTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTTATTTTGACAGTGAAGCCACAATATGGATTTGGTGAGAAAGGGAAGCCAGCAGATGGTGATGAAGGAGCAGTTCAACCAAATGCAACATTGCAGATTACTCTCGAGTTAGTCTCTTGGAAGACTGTGTCTGAGGTAACTGATGACAAGAAAGTGGTGAAGAAGATACTCAGTGAAGGGCAAGGATATGAGCGGCCAAATGAGGGGGCTGTTGTGAAAGTGAAACTGACTGGTAAGCTGAAAGATGGCACTGTCTTTGTGACAAAGGGCCATGAAGAGGAGCTGTTTCAATTTAGAACAGACGAAGAGCAAGTCATTGATGGGCTTGATAGAGGTGTAATGTCCATGAAGAAAGGTGAAGTGGCATTACTGACTATTGCACCTGAGTATGCTTTCGGTTCGGCAGAATCCCAGCAAGAGTTGGCTGTTGTTCCTCCTAACTCAACTGTGTATTATGAGGTGGAGCTAGTTTCGTTCGAGAAGGAGAAGGAGTCCTGGGATCTGAACACTCAAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGTATTATTTAAAGCTGGTAAATATGTAAGAGCTTCCAAAAGATATGATAAGGCAGTAAAGTTTATAGAATATGATTCCTCCTTCAGCGCTGATGAGAAAAAACAGGCCAAGACCTTGAAGGTTGCCTGCAATCTGAACAATGCTGCTTGCAAGTTGAAGTTAAAAGAATATAAAGAAGCAGAGAAATTGTGTACAAAGGTCCTGGAGCTTGAGAGTACCAACGTGAAAGCTCTTTACAGAAGGGCCCAGGCATATATGCAGTTGGCTGATTTGGATTTGGCTGAATTTGACATTAAGAAAGCTCTTGATATTGATCCTGACAATAGGGAGGTAAAGCTGGAGTACAAGACTTTGAAGGAGAAGGTTAAGGAGTATAACAAAAAGGAGCAGAAGTTTTATGGAAACATATTCAACAAGTTGACAAAGGCTGGTTCTTGA 1653 0.4398 MEEDFDMPQAEEMNEDFDLPDEDPILKVGEEKEIGNQGLKKKLLKEGQGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRDSTFKFTLGQGQVIKGWDEGIKTMKKGENALFTIPPALAYGASGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILKEGEGWENPKDPDEVLVKYEVLLEDGKAVAKSDGVEFSVREGHYCPALSKAVKTMKKGEKVILTVKPQYGFGEKGKPADGDEGAVQPNATLQITLELVSWKTVSEVTDDKKVVKKILSEGQGYERPNEGAVVKVKLTGKLKDGTVFVTKGHEEELFQFRTDEEQVIDGLDRGVMSMKKGEVALLTIAPEYAFGSAESQQELAVVPPNSTVYYEVELVSFEKEKESWDLNTQEKIEAAGKKKEEGNVLFKAGKYVRASKRYDKAVKFIEYDSSFSADEKKQAKTLKVACNLNNAACKLKLKEYKEAEKLCTKVLELESTNVKALYRRAQAYMQLADLDLAEFDIKKALDIDPDNREVKLEYKTLKEKVKEYNKKEQKFYGNIFNKLTKAGS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01767 550 Pfam Tetratricopeptide repeat 480 513 IPR001440 GO:0005515
Aip04g01767 550 Gene3D - 262 381 IPR046357 GO:0003755
Aip04g01767 550 SUPERFAMILY TPR-like 386 544 IPR011990 GO:0005515
Aip04g01767 550 SMART tpr_5 397 430 IPR019734 GO:0005515
Aip04g01767 550 SMART tpr_5 480 513 IPR019734 GO:0005515
Aip04g01767 550 SMART tpr_5 446 479 IPR019734 GO:0005515
Aip04g01767 550 Gene3D - 32 147 IPR046357 GO:0003755
Aip04g01767 550 Coils Coil 513 533 - -
Aip04g01767 550 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Aip04g01767 550 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 257 IPR001179 GO:0003755
Aip04g01767 550 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 377 IPR001179 GO:0003755
Aip04g01767 550 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 141 IPR001179 GO:0003755
Aip04g01767 550 PANTHER PEPTIDYLPROLYL ISOMERASE 270 379 - -
Aip04g01767 550 PANTHER PEPTIDYLPROLYL ISOMERASE 379 550 - -
Aip04g01767 550 PANTHER PEPTIDYLPROLYL ISOMERASE 1 268 - -
Aip04g01767 550 MobiDBLite consensus disorder prediction 1 24 - -
Aip04g01767 550 MobiDBLite consensus disorder prediction 1 19 - -
Aip04g01767 550 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 379 550 - -
Aip04g01767 550 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 270 379 - -
Aip04g01767 550 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 268 - -
Aip04g01767 550 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 380 IPR001179 GO:0003755
Aip04g01767 550 Gene3D - 148 261 IPR046357 GO:0003755
Aip04g01767 550 SUPERFAMILY FKBP-like 266 397 - -
Aip04g01767 550 SUPERFAMILY FKBP-like 148 264 - -
Aip04g01767 550 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Aip04g01767 550 ProSiteProfiles TPR repeat profile. 480 513 IPR019734 GO:0005515
Aip04g01767 550 SUPERFAMILY FKBP-like 33 149 - -
Aip04g01767 550 Gene3D Tetratricopeptide repeat domain 383 540 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01767 Aip-Chr4 72379491 72383640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01767 25 545 Calmodulin-binding Proteins AT3G25230 81.836 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01767 K09571 - gmx:100812632 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01767 04 72379491 72383640 Aip09g00976 09 13604608 13609256 PCT