Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01765 GAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCGTGCTTTCGGTGATAGACTTCTGAAACAGTATGTTGTTGCTGATACAGAAATCTACGAAGAAAAAGAAGCTGTTGCAATAATAAAGAAAATAGATGATGCAGAGAAGGCGGCAAAGAAGTTGATGCAAGAAGCATATCAGAGAGGTAGTTCCGACAACACTACTTGTGTTGTGGTTCGTTTCTTGACGAACCAAGGTGCTGCTTTTGGTACTAGCTCCGGCTAA 260 0.4346 TWRVGGVLAVSRAFGDRLLKQYVVADTEIYEEKEAVAIIKKIDDAEKAAKKLMQEAYQRGSSDNTTCVVVRFLTNQGAAFGTSSG 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01765 85 Gene3D - 1 80 IPR036457 -
Aip04g01765 85 PANTHER ALPHABET, ISOFORM E-RELATED 34 79 - -
Aip04g01765 85 ProSiteProfiles PPM-type phosphatase domain profile. 1 72 IPR001932 -
Aip04g01765 85 Coils Coil 35 55 - -
Aip04g01765 85 SUPERFAMILY PP2C-like 2 72 IPR036457 -
Aip04g01765 85 PANTHER ALPHABET, ISOFORM E-RELATED 2 33 - -
Aip04g01765 85 Pfam Protein phosphatase 2C 2 30 IPR001932 -
Aip04g01765 85 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 34 79 - -
Aip04g01765 85 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 2 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01765 Aip-Chr4 72327055 72327849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01765 1 84 PP2C-type Phosphatase Gene Family AT4G31750 59.434 2.93e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01765 K17506 - gmx:547661 104.76