Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01763 ATGTTGGTGGTGATAGAGCAGCAAGAGACAGAGGATCGAAACGCCAATCCCTCCAACGCGGTTGCGGGTAACGACGCTTCTGACGGTTTTGAAACGGCCAGCGACACCGACCTTGGCAGTGACAACGGAGGCGATGACGTCGGAGCTAGCAGCTATGATCAACGGCAGCAGCAACATCAACAGCAGCAGCTGAAGACAGAGCTTTCCGAGCTGGAGCCGGAGCCGGAGCCTGAGCAGAGTGTTTCTCCAAGTAATAGTTACTCTGGGGATCTCTTGATCAATGAGGAGTTGGAGAAGAAAGCATTGGTTCAAGCAAATGAAGCAAAGGCAGAAGGGAACAAGCTTTTTGTGGATGGGAAGTATGAGGAAGCATTATCCCAGTATGAACTTGCTCTACAAGTTGCACCTGACATGTCTTCATTGGTTGAAATACGCTCGATATGCCATGCAAACCGTGCTGTGTGCTTTCAGAAACTGGGAAAATATGACAACACAGTTAAAGAATGCACAAAAGCACTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTATTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGGGAAATCATGAAGGAAGAGATGATTGCAAAACTAAAAGAAATGGGAAATTCTGTCCTGGGCCGTTTTGGGATGAGTGTCGATAACTTCAAAGCAGTTAAAGATCCAAACACTGGTTCCTATTCTATCTCATTCCAGCGTTAA 834 0.4544 MLVVIEQQETEDRNANPSNAVAGNDASDGFETASDTDLGSDNGGDDVGASSYDQRQQQHQQQQLKTELSELEPEPEPEQSVSPSNSYSGDLLINEELEKKALVQANEAKAEGNKLFVDGKYEEALSQYELALQVAPDMSSLVEIRSICHANRAVCFQKLGKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIIDMKKILEIDPSNDQARKAIRRLEPLAAEKREIMKEEMIAKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01763 277 MobiDBLite consensus disorder prediction 1 88 - -
Aip04g01763 277 ProSiteProfiles TPR repeat profile. 105 138 IPR019734 GO:0005515
Aip04g01763 277 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Aip04g01763 277 Pfam Tetratricopeptide repeat 150 177 IPR019734 GO:0005515
Aip04g01763 277 MobiDBLite consensus disorder prediction 9 39 - -
Aip04g01763 277 MobiDBLite consensus disorder prediction 47 68 - -
Aip04g01763 277 Pfam Tetratricopeptide repeat 181 213 IPR013105 -
Aip04g01763 277 Gene3D Tetratricopeptide repeat domain 65 244 IPR011990 GO:0005515
Aip04g01763 277 SUPERFAMILY TPR-like 105 223 IPR011990 GO:0005515
Aip04g01763 277 SMART tpr_5 146 179 IPR019734 GO:0005515
Aip04g01763 277 SMART tpr_5 180 213 IPR019734 GO:0005515
Aip04g01763 277 SMART tpr_5 105 138 IPR019734 GO:0005515
Aip04g01763 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 27 277 - -
Aip04g01763 277 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 27 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01763 Aip-Chr4 71674349 71678070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01763 74 247 Calmodulin-binding Proteins AT3G25230 34.375 3.71e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01763 K24926 - gmx:100808386 370.933