Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01759 ATGCCTTCTCGGACGTTCTCCGCTGTCGCCGCCGCCGCTCGTGTCGCACAAGCTCCCTCCACCGCCGCTCGTGTCGCACAAGCTTCTTCCACTGCCGCTCTCAATGCATTTGATCCTTTCGTCATCACACGAGCTCTCTCGGCCGTGCTCTTGTCTTACGAGCTCCCTCCCCCGCCGCTCTCGCGCTGCTTCTTCTCTCCTCGCCGGATGTTTGTCATTGAAAAGGAAAATGCTGCTGAGGAACACAGACGGAATTTAGCAGAATACAGGAAATTCTTGGAGTCATGTGATTATATGAAGGTTCACAGTCCATGGCGAAAAGTCCAAGATCGGTTAGAGGACGATGATAGATATTTACGGCTTGAAGAAATTGACCGCTTGCTTGTTTTCCAGTTTTTTGCTTCCAATGGTTTTCCATGTCCTGCACTCCAAAACCCTTCTGATTATTTACTGAAAACTGTAAACAAGGATTTTGATCAGGATATTGTCATGGGTTTATCTGGCACTAGAACAGTGCCTACAGAAGAAGCAATTAGAATCCTTATAAGCGCATATGAATCATCTGAAATTAACCAACAAGTTCAACAAGAAGTTGCAATGCTATCTAAGCAGAAATGCAAGCATTACTTGAGAAGGTTTAGGAAGATGCATGGAAAGCAAAGAATAATTCACAGTATGAATGATTATGCAGAGTTCCTATTTCAGAGATGGAAGCAAGATATTGATGATGAGGATGATCCATCTTCAAGTGGGAGGCCATCATGGTTTAGAAAGCAATATACCGCTGGAGCCTCTGGAAAGCACAGGAATAACGGTCAAGGAAGTCATCGATACAGAAATCAATGGGGGATGAAAACTACAGTAGAGAAGTATTTGAGGAGTACATTACACTCACTCTCCTATTTATCAAATAATAGGGCTGGGAATGGGGAACTTGTAGTTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGACTGGCTCAGAATTGTGAGGCTGCTAGGAAGAGTCGATTGAGGAAGAAGATCATCTTGGATAGGGAGTATCTAAATGATGTTTCCATTAGCAGAGAACAATTGAAGTACCTGGTTTTTGAAGCTTTCCGAGGAGATATCCAGAAGTTATTTGAACTGATCAATAAATGCAATGTGGGATACACATTTATCAACATGTTGTCGGCATCACACATTATTCCATTCTATGAGACATTTAATGGGAAGAAGTGGGAGAAGTTTAATAGTGAAAAAGTTGCTTCTCTGGCATATGCACGAATCCAAGGAAAGGCTGCACTGCCTCAGAGTAGTGGTGTGGGTCTCAGCGAGTCCGCATCGTCGTCAACGCCGTGGTGCTCCATCTTCCCCTTCATCGCTCTACTTCCAGAGTTCTAA 1410 0.439 MPSRTFSAVAAAARVAQAPSTAARVAQASSTAALNAFDPFVITRALSAVLLSYELPPPPLSRCFFSPRRMFVIEKENAAEEHRRNLAEYRKFLESCDYMKVHSPWRKVQDRLEDDDRYLRLEEIDRLLVFQFFASNGFPCPALQNPSDYLLKTVNKDFDQDIVMGLSGTRTVPTEEAIRILISAYESSEINQQVQQEVAMLSKQKCKHYLRRFRKMHGKQRIIHSMNDYAEFLFQRWKQDIDDEDDPSSSGRPSWFRKQYTAGASGKHRNNGQGSHRYRNQWGMKTTVEKYLRSTLHSLSYLSNNRAGNGELVVVDSNDQTKLKHEDQKTLRRLAQNCEAARKSRLRKKIILDREYLNDVSISREQLKYLVFEAFRGDIQKLFELINKCNVGYTFINMLSASHIIPFYETFNGKKWEKFNSEKVASLAYARIQGKAALPQSSGVGLSESASSSTPWCSIFPFIALLPEF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01759 469 PANTHER RNA RECOGNITION MOTIF-CONTAINING 387 438 - -
Aip04g01759 469 Pfam FF domain 85 130 IPR002713 -
Aip04g01759 469 Pfam RNA recognition motif 2 384 438 IPR007201 -
Aip04g01759 469 ProSiteProfiles FF domain profile. 82 136 IPR002713 -
Aip04g01759 469 SUPERFAMILY FF domain 74 133 IPR036517 -
Aip04g01759 469 Gene3D FF domain 73 136 IPR036517 -
Aip04g01759 469 PANTHER PROTEIN MEI2-LIKE 4 387 438 - -
Aip04g01759 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 332 347 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01759 Aip-Chr4 70432943 70438900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01759 305 349 bZIP Transcription Factor Family AT1G68640 60.000 1.97e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01759 - - aip:107637913 280.796